Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01071 ATGGAACAAGTATTTCAAGCGTTTCTCCTCCTGCTTCTATACCAATCTCTGCTTGTATCAGCGCAGAGCTTTTATCGGGACTTTAGTTCCCTACAATCTCTCACAGAATCATGGCAGAACAAACCACCAAGTTGGGTGGGTTCAGATCCTTGTGGCCGTGGTTGGGAAGGAATTGAATGCACCAATTCAAGAGTGACCTCAATATTATTAGCAAGCATGAATTTGGTGGGCAAGCTTTCTTCAGATATCCAGTTATTATCTGAGTTAGACACTTTGGATCTCTCTTACAACAAGGGCCTGACAGGAACAATTCCTCAGGAGATTGGAAATTTGAGAAAATTAAAAACGCTTTTATTGGTTGGTTGTAGTTTCTCTGGTAGTATTCCAGCTTCAATAGGATCTTTGCAGCAGCTGGATTTTCTAGCTCTGAACTATAATCAGTTCAGTGGAAACATTCCACCTACCGTTGGCAATCTAACCAATATTATTTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCAATCTCTAAAGCAGGAGTACTTGGACTTGAAAAGCTGCTTACGGCAAAGCACTTTCACTTGGGAAACAATAGGCTCTCAGGTGGAATCCCAGCTCAACTTTTTAGTTCAAATATGAGTCTGATCCATGTCCGTTTCGATGGGAACCAATTCAGTGGGAGCGTGCCTTCAACTATCAGCAATCTCAGAAATCTTGGTGATCTATACTTATCAAATAATAAGTTGAATGGTTCTCTGCCAGATCTTACAGGAATGAATCTTCTAGCCTATGTGGATCTGAGCAACAATACTTTCGATTCTTCTGTTATTCCTTCATGGGCTTCAAATTTGTCGCTTATGACAACATTGGTATTGAAGGGCAACCAGCTCAATGGCACCCTAGATATTGGCAATGCCAACAGCAACCGCTTGCAACTTATTGATTTGGAGAATAATACAATCACCGACTTCACGCAGAAAAACATGAACTATAAAGTTTCAGTAGTACTAGTTCGCAACCGGATTTGCCTTGAAGCAGAAGCTTCTACCAAACGTTACTGCCAAGAACCCACATCCAGTTCCTTATATTCAACGCAGCCAAATAATTGCTCACCTCTTCCTTGCAGTTCTGGTCAGATTTCCAGTCCTAACTGCCAATGTTCATATCCATACACTGGAACTCTATTTTCCAGAGTTATTAGTTTCTCAGACCTTGGTAATGCAAGTTATTATAAAGAACTTGAGCAATCTCTGGTGACTGCTTTTCAATCACAAAATCTCCCAGTGGATTCTGTCTCTCTAAGTAATCCGTTCAGGAATCCATCTACTGATTACCTTCAATTGTCCCTGAAAGTCTTCCCATCTTCAAGCGATCGATTCAATAGAACTGGAGTTTCAAATATTGCTTTTGTGATTAGCAGCCAGCTTCTCAACTTCCCAAATTTTTTCCTTCCTTACTTCTTCATTGGTGATGTCTATGGATTCGATGCAGCATATGGATCAAAGAAGTCATCACATACAGGGCTTATAGTTGGTGTAGTAGTTGCTGTTGTGATCCTTCTGGTATTAGTACTTCTTGCAGTAATATATGCAGTACGTCAAAGGAAAAGAGTAAAAAGATCTGCTGAACTGAACCCTTTTGTAAACTGGGAACTGAACAAGAACAGCGGTAAGGCTCCACAGTTAAAAGGAGCACGATGGTTTTCTTTAGAAGATCTAAAAAAATACACCAACAACTTCTCTGAAGACAACACTGTTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACAAGTTGCTATCAAACGGGCTGCAAAAGAATCCATGCAGGGTTCTGGTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTCAGTCTTGCGGGTTTCTGTTTCGATAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCAAACGGCACTTTAATGGATAGTCTTTCAGGAAAGTCTGAGATCAAAATGGATTGGATGAGAAGACTTAAAGTAGCTCAGGGTGCAGCCAGAGGCCTGACCTATCTTCATGAACTTGCCGACCCACCAATCATACATAGGGACATAAAATCAAGCAACATTCTACTCGATGAGCGCCTTAACGCAAAGGTTGCGGATTTCGGACTCTCCAAGCTTCTTGTTGACACTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTATTATATGACACAACAGTTGACTGAAAAAAGTGATGTATATAGCTTCGGAGTGCTGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGAAATATATAGTGCGAGAGGTACAAAATGTAATGGATACATCGAAAGAACTATTCAACCTCCATTCCATCATAGATCCATTCATCAACAAAGTGACTCCTCCACATGGTTTGGAGAAGTTTGTGGCCCTGGCAATGAGATGTGTCAGAGAATATGCAGCTCAGAGACCATCAATGGCTGAGGTGGTAAAGGAGATTGAGAATATAATGGAGCTTGCTGGATTGAACCCTACTTCTGAATCAGATCCAACCACAGAAGAAATCGATGTGGAGGCACGTGGCGGCAAGCTACGTCATCCTTATGACCATCAAGAAGGTTTTAGCTATAGTGGACCCTTTCCTTCAACAAAGGTAGAGCCTCAGTGA 2721 0.4171 MEQVFQAFLLLLLYQSLLVSAQSFYRDFSSLQSLTESWQNKPPSWVGSDPCGRGWEGIECTNSRVTSILLASMNLVGKLSSDIQLLSELDTLDLSYNKGLTGTIPQEIGNLRKLKTLLLVGCSFSGSIPASIGSLQQLDFLALNYNQFSGNIPPTVGNLTNIIWLDLSDNQLEGPIPISKAGVLGLEKLLTAKHFHLGNNRLSGGIPAQLFSSNMSLIHVRFDGNQFSGSVPSTISNLRNLGDLYLSNNKLNGSLPDLTGMNLLAYVDLSNNTFDSSVIPSWASNLSLMTTLVLKGNQLNGTLDIGNANSNRLQLIDLENNTITDFTQKNMNYKVSVVLVRNRICLEAEASTKRYCQEPTSSSLYSTQPNNCSPLPCSSGQISSPNCQCSYPYTGTLFSRVISFSDLGNASYYKELEQSLVTAFQSQNLPVDSVSLSNPFRNPSTDYLQLSLKVFPSSSDRFNRTGVSNIAFVISSQLLNFPNFFLPYFFIGDVYGFDAAYGSKKSSHTGLIVGVVVAVVILLVLVLLAVIYAVRQRKRVKRSAELNPFVNWELNKNSGKAPQLKGARWFSLEDLKKYTNNFSEDNTVGSGGYGKVYRAVLPTGEQVAIKRAAKESMQGSGEFKTEIELLSRVHHKNLVSLAGFCFDKGEQMLVYEYIPNGTLMDSLSGKSEIKMDWMRRLKVAQGAARGLTYLHELADPPIIHRDIKSSNILLDERLNAKVADFGLSKLLVDTERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQNVMDTSKELFNLHSIIDPFINKVTPPHGLEKFVALAMRCVREYAAQRPSMAEVVKEIENIMELAGLNPTSESDPTTEEIDVEARGGKLRHPYDHQEGFSYSGPFPSTKVEPQ 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01071 906 Gene3D Ribonuclease Inhibitor 17 183 IPR032675 -
Accr5g01071 906 ProSiteProfiles Protein kinase domain profile. 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01071 906 CDD STKc_IRAK 588 854 - -
Accr5g01071 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Accr5g01071 906 FunFam Leucine-rich repeat protein kinase family protein 550 657 - -
Accr5g01071 906 SUPERFAMILY L domain-like 30 324 - -
Accr5g01071 906 MobiDBLite consensus disorder prediction 871 888 - -
Accr5g01071 906 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 864 - -
Accr5g01071 906 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 658 867 - -
Accr5g01071 906 Gene3D Ribonuclease Inhibitor 184 342 IPR032675 -
Accr5g01071 906 MobiDBLite consensus disorder prediction 860 906 - -
Accr5g01071 906 Pfam Protein kinase domain 583 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01071 906 ProSitePatterns Protein kinases ATP-binding region signature. 588 614 IPR017441 GO:0005524
Accr5g01071 906 ProSiteProfiles Leucine-rich repeat profile. 240 262 IPR001611 GO:0005515
Accr5g01071 906 SMART serkin_6 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01071 906 Gene3D Phosphorylase Kinase; domain 1 552 657 - -
Accr5g01071 906 SUPERFAMILY Protein kinase-like (PK-like) 562 851 IPR011009 -
Accr5g01071 906 Gene3D Transferase(Phosphotransferase) domain 1 658 873 - -
Accr5g01071 906 FunFam Leucine-rich repeat family protein 26 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01071 Accr-Chr5 36270554 36278615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01071 8 906 Receptor kinase-like Gene Family AT5G49760 51.420 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr5g01071 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01071 - - gmx:100786172 1141.33