Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01070 ATGGAACAAGTATTTCAAGCGTTTCTCCTCCTGCTTCTATACCAATCTCTGCTTGTATCAGCGCAGAGCTTTTATCGGGACTTTAGTTCCCTACAATCTCTCACAGAATCATGGCAGAACAAACCACCAAGTTGGGTGGGTTCAGATCCTTGTGGCCGTGGTTGGGAAGGAATTGAATGCACCAATTCAAGAGTGACCTCAATATTATTAGCAAGCATGAATTTGGTGGGCAAGCTTTCTTCAGATATCCAGTTATTATCTGAGTTAGACACTTTGGATCTCTCTTACAACAAGGGCCTGACAGGAACAATTCCTCAGGAGATTGGAAATTTGAGAAAATTAAAAACGCTTTTATTGGTTGGTTGTAGTTTCTCTGGTAGTATTCCAGCTTCAATAGGATCTTTGCAGCAGCTGGATTTTCTAGCTCTGAACTATAATCAGTTCAGTGGAAACATTCCACCTACCGTTGGCAATCTAACCAATATTATTTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCAATCTCTAAAGCAGGAGTACTTGGACTTGAAAAGCTGCTTACGGCAAAGCACTTTCACTTGGGAAACAATAGGCTCTCAGGTGGAATCCCAGCTCAACTTTTTAGTTCAAATATGAGTCTGATCCATGTGCTTCTTAATAACAATCAATTAAATGGCAGTATTCCTAATACCATTGGGCGGGTGAACTCATTGCAGGCAGTCCGTTTCGATGGGAACCAATTCAGTGGGAGCGTGCCTTCAACTATCAGCAATCTCAGAAATCTTGGTGATCTATACTTATCAAATAATAAGTTGAATGGTTCTCTGCCAGATCTTACAGGAATGAATCTTCTAGCCTATGTGGATCTGAGCAACAATACTTTCGATTCTTCTGTTATTCCTTCATGGGCTTCAAATTTGTCGCTTATGACAACATTGGTATTGAAGGGCAACCAGCTCAATGGCACCCTAGATATTGGCAATGCCAACAGCAACCGCTTGCAACTTATTGATTTGGAGAATAATACAATCACCGACTTCACGCAGAAAAACATGAACTATAAAGTTTCAGTAGTACTAGTTCGCAACCGGATTTGCCTTGAAGCAGAAGCTTCTACCAAACGTTACTGCCAAGAACCCACATCCAGTTCCTTATATTCAACGCAGCCAAATAATTGCTCACCTCTTCCTTGCAGTTCTGGTCAGATTTCCAGTCCTAACTGCCAATGTTCATATCCATACACTGGAACTCTATTTTCCAGAGTTATTAGTTTCTCAGACCTTGGTAATGCAAGTTATTATAAAGAACTTGAGCAATCTCTGGTGACTGCTTTTCAATCACAAAATCTCCCAGTGGATTCTGTCTCTCTAAGTAATCCGTTCAGGAATCCATCTACTGATTACCTTCAATTGTCCCTGAAAGTCTTCCCATCTTCAAGCGATCGATTCAATAGAACTGGAGTTTCAAATATTGCTTTTGTGATTAGCAGCCAGCTTCTCAACTTCCCAAATTTTTTCCTTCCTTACTTCTTCATTGGTGATGTCTATGGATTCGATGCAGCATATGGATCAAAGAAGTCATCACATACAGGGCTTATAGTTGGTGTAGTAGTTGCTGTTGTGATCCTTCTGGTATTAGTACTTCTTGCAGTAATATATGCAGTACGTCAAAGGAAAAGAGTAAAAAGATCTGCTGAACTGAACCCTTTTGTAAACTGGGAACTGAACAAGAACAGCGGTAAGGCTCCACAGTTAAAAGGAGCACGATGGTTTTCTTTAGAAGATCTAAAAAAATACACCAACAACTTCTCTGAAGACAACACTGTTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACAAGTTGCTATCAAACGGGCTGCAAAAGAATCCATGCAGGGTTCTGGTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTCAGTCTTGCGGGTTTCTGTTTCGATAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCAAACGGCACTTTAATGGATAGTCTTTCAGGAAAGTCTGAGATCAAAATGGATTGGATGAGAAGACTTAAAGTAGCTCAGGGTGCAGCCAGAGGCCTGACCTATCTTCATGAACTTGCCGACCCACCAATCATACATAGGGACATAAAATCAAGCAACATTCTACTCGATGAGCGCCTTAACGCAAAGGTTGCGGATTTCGGACTCTCCAAGCTTCTTGTTGACACTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTATTATATGACACAACAGTTGACTGAAAAAAGTGATGTATATAGCTTCGGAGTGCTGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGAAATATATAGTGCGAGAGGTACAAAATGTAATGGATACATCGAAAGAACTATTCAACCTCCATTCCATCATAGATCCATTCATCAACAAAGTGACTCCTCCACATGGTTTGGAGAAGTTTGTGGCCCTGGCAATGAGATGTGTCAGAGAATATGCAGCTCAGAGACCATCAATGGCTGAGGTGGTAAAGGAGATTGAGAATATAATGGAGCTTGCTGGATTGAACCCTACTTCTGAATCAGATCCAACCACAGAAGAAATCGATGTGGAGGCACGTGGCGGCAAGCTACGTCATCCTTATGACCATCAAGAAGGTTTTAGCTATAGTGGACCCTTTCCTTCAACAAAGGTAGAGCCTCAGTGA 2793 0.4168 MEQVFQAFLLLLLYQSLLVSAQSFYRDFSSLQSLTESWQNKPPSWVGSDPCGRGWEGIECTNSRVTSILLASMNLVGKLSSDIQLLSELDTLDLSYNKGLTGTIPQEIGNLRKLKTLLLVGCSFSGSIPASIGSLQQLDFLALNYNQFSGNIPPTVGNLTNIIWLDLSDNQLEGPIPISKAGVLGLEKLLTAKHFHLGNNRLSGGIPAQLFSSNMSLIHVLLNNNQLNGSIPNTIGRVNSLQAVRFDGNQFSGSVPSTISNLRNLGDLYLSNNKLNGSLPDLTGMNLLAYVDLSNNTFDSSVIPSWASNLSLMTTLVLKGNQLNGTLDIGNANSNRLQLIDLENNTITDFTQKNMNYKVSVVLVRNRICLEAEASTKRYCQEPTSSSLYSTQPNNCSPLPCSSGQISSPNCQCSYPYTGTLFSRVISFSDLGNASYYKELEQSLVTAFQSQNLPVDSVSLSNPFRNPSTDYLQLSLKVFPSSSDRFNRTGVSNIAFVISSQLLNFPNFFLPYFFIGDVYGFDAAYGSKKSSHTGLIVGVVVAVVILLVLVLLAVIYAVRQRKRVKRSAELNPFVNWELNKNSGKAPQLKGARWFSLEDLKKYTNNFSEDNTVGSGGYGKVYRAVLPTGEQVAIKRAAKESMQGSGEFKTEIELLSRVHHKNLVSLAGFCFDKGEQMLVYEYIPNGTLMDSLSGKSEIKMDWMRRLKVAQGAARGLTYLHELADPPIIHRDIKSSNILLDERLNAKVADFGLSKLLVDTERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQNVMDTSKELFNLHSIIDPFINKVTPPHGLEKFVALAMRCVREYAAQRPSMAEVVKEIENIMELAGLNPTSESDPTTEEIDVEARGGKLRHPYDHQEGFSYSGPFPSTKVEPQ 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01070 930 ProSiteProfiles Protein kinase domain profile. 606 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01070 930 FunFam Leucine-rich repeat family protein 26 181 - -
Accr5g01070 930 SMART serkin_6 606 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01070 930 ProSitePatterns Protein kinases ATP-binding region signature. 612 638 IPR017441 GO:0005524
Accr5g01070 930 Gene3D Ribonuclease Inhibitor 183 368 IPR032675 -
Accr5g01070 930 Gene3D Ribonuclease Inhibitor 16 182 IPR032675 -
Accr5g01070 930 Gene3D Phosphorylase Kinase; domain 1 576 681 - -
Accr5g01070 930 Gene3D Transferase(Phosphotransferase) domain 1 682 897 - -
Accr5g01070 930 FunFam Leucine-rich repeat protein kinase family protein 574 681 - -
Accr5g01070 930 CDD STKc_IRAK 612 878 - -
Accr5g01070 930 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Accr5g01070 930 Pfam Protein kinase domain 607 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01070 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Accr5g01070 930 ProSiteProfiles Leucine-rich repeat profile. 264 286 IPR001611 GO:0005515
Accr5g01070 930 MobiDBLite consensus disorder prediction 895 912 - -
Accr5g01070 930 PANTHER RECEPTOR-LIKE PROTEIN 55 36 878 - -
Accr5g01070 930 SUPERFAMILY Protein kinase-like (PK-like) 586 875 IPR011009 -
Accr5g01070 930 MobiDBLite consensus disorder prediction 884 930 - -
Accr5g01070 930 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 682 891 - -
Accr5g01070 930 SUPERFAMILY L domain-like 32 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01070 Accr-Chr5 36270554 36278615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01070 8 930 Receptor kinase-like Gene Family AT5G49760 52.366 0.0 906
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr5g01070 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01070 - - gmx:100786172 1175.23