Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01062 ATGGATAGCTATGGAGCGGAAGACTTGTTCCAAGCTCAGGCTCATTTGTATAAGCTCATATTCAACTTCATTAGCACCATGTCTCTTAAAAGTGCAATCGACCTTGGCATACCAGATACAATCCACAGCCATGGCCAACCCATGACTCTCCCGATGCTAGTCTTGGCACTTAAGATTGACCCTGCAAAATCTGGTTTTCTCTATAGACTCATGCGCTTCTTGGTTCACTCTGGCCTTTTTGTCAAAACCAAAGTTGGTAAAAGAGGCAAGGAAGAAGAAGAGGAGGAGGCTTATGATCTCTCACCTTGTTCCAGGCTTCTCGTCCAAGGAAATGCCCCAAACTTGACTTGTTTTGCACAGTGTGTTTTTCACCCTGCTCTGTCAGATCCATGGAAATTGCTGGCAGACTGGTTCTACAGAGAAGAAGTCAACCCTTTTCACTGTACGTTTGGGATGGGGTTTTGGGAGTATGGTAGTGAAAACCCTGAGTATGGCAAGCTTTATAATAAAGCCATGGTGAGAGACTCTGAGATGATGAACTTGGTGATTAGAGATTGCAGATCAGTTTTTGAAGGTATGCAATCGATGGTTGATGTTGGAGGTGGGAATGGAGCTGTGGCTAGGATCATTTCTGAGGAGTTTCCTGACATGAAATTCACAGTGCTAGATCTTCCCCATGTTACTGGGGATTTGGAGGATACTGAAAATCTCAAGTTTGTTGCAGGTGATATGTTTCACCATATTCCTCCCGCTGACTCCATTCTTCTCAAGTTAGTATTACATGCCTACAGTGACGAAGACTCTGTGAGGATCCTGAAGAAATGCAGAGAGGCTATTTCAGGGAAAGGGAAAGAAGGAAAAGTGATAATAATAGACATAGTGATAAACGAGAAAGAGGAGAAGCATGAATTGACAGACCCAAAACTGTACTTTGATTTGTTGATGATGGTTGCTGTCACTGGAAGAGAAAGAGAGGAAAGAGAATGGAAGAAGCTCTTCTTGGAAGCAGGGTTCAGTCACTACAAGATAACACCCTTCTTTGGTTTGAGGTCTCTTCTTGAAGTTTATCCTTAA 1074 0.4311 MDSYGAEDLFQAQAHLYKLIFNFISTMSLKSAIDLGIPDTIHSHGQPMTLPMLVLALKIDPAKSGFLYRLMRFLVHSGLFVKTKVGKRGKEEEEEEAYDLSPCSRLLVQGNAPNLTCFAQCVFHPALSDPWKLLADWFYREEVNPFHCTFGMGFWEYGSENPEYGKLYNKAMVRDSEMMNLVIRDCRSVFEGMQSMVDVGGGNGAVARIISEEFPDMKFTVLDLPHVTGDLEDTENLKFVAGDMFHHIPPADSILLKLVLHAYSDEDSVRILKKCREAISGKGKEGKVIIIDIVINEKEEKHELTDPKLYFDLLMMVAVTGREREEREWKKLFLEAGFSHYKITPFFGLRSLLEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01062 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Accr5g01062 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Accr5g01062 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Accr5g01062 357 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Accr5g01062 357 FunFam Coniferyl alcohol 9-O-methyltransferase 1 107 - -
Accr5g01062 357 Pfam O-methyltransferase domain 131 339 IPR001077 GO:0008171
Accr5g01062 357 Gene3D - 1 107 IPR036388 -
Accr5g01062 357 FunFam O-methyltransferase ZRP4 109 357 - -
Accr5g01062 357 CDD AdoMet_MTases 197 295 - -
Accr5g01062 357 SUPERFAMILY "Winged helix" DNA-binding domain 7 111 IPR036390 -
Accr5g01062 357 PANTHER O-METHYLTRANSFERASE 10 342 IPR016461 GO:0008168
Accr5g01062 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 357 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01062 Accr-Chr5 36199901 36202264 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01062 27 343 Monolignol Biosynthesis Gene Families AT5G54160 30.218 8.36e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01062 K22588 - qsa:O6P43_012698 469.159