Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01059 ATGGCTATGAACCAAAGCAATGTAGACGCAGACTTGTTTCAAGCTCAGGCCCATCTCTATAAACACGTACTCAATTACTTGACCTCCATGTGTCTAAAGAGTGCTATGCAGCTGAACATACCAGACATAATCCACAGCCATGGCCGACCCACCACCCTCCCTGAGCTGCTCTCTGCTCTCCACATCGACCCTGCAAAATCTTGCCATCTCTATAGGCTCATGCGCTTACTGGTTCACTCTGGCTTCTTCTCTACTTCCAAATCTGACGGGGAAGAAGATGTCGGATACGATCTCACACCTTCCTCTAGGCTTCTCCTCAAAAACAATATCCCAAGCTTGTCTTCTTACGCTCAGTTACTTCTTCATCCAGTTATGGTGCATTCATCGGAATCCTTGGGAGATTGGTTTCGCAGTAATGAACCCACCCCCTTTCACACTGCACATGAGGTGGGATTGTGGGAATATATCAGCCAAAACCAGGAGTTTAACAGGTTCTTTAATGAATCTATGATAGGTGATTCAAGTATGATGGACTTGGTGATTAAAGATTGCAAATCAGTCTTTGAGGGATTTGACACATTGGTCGATGTTGGGGGTGGCAATGGATCTGTTGCAAGGATTATATCTGAGTCATTGCCTCATCTGCAATGCATTGTGCTAGATCTTCCACATGTTGTTCAAAACTTACAAGACAGCGGAAATTTGAAGTTCATCGGAGGGGATATGTTTCAGTCCATGCCTCCAGCAGATTCCTTTCTTTTTAAGTTGGTTTTACACGCTTATAGTGATGAAGACTGTGTGAAGGTGCTGAAGAAGTGCAGGGAAGCCATTGCAAGCAAAGGCAAAGAAGGGAAAGTGATTATAATAGACATAGTGATCAATGAGGAGAAAGATGAAGCAGACCTGAAAGATGCTAAGCTGTTCTTTGATGCGTTCATGATGGCTGTGGTGACTGGAAGAGAGAGAGAAGAAAAGGAATGGGAGAAGCTGTTCCTTGAAGCTGGTTTCAGTCACTACAAGATAACACCTGTTTTTGGTTTAAGGTCCCTGATTGAAGTGTATCCTTGA 1068 0.4401 MAMNQSNVDADLFQAQAHLYKHVLNYLTSMCLKSAMQLNIPDIIHSHGRPTTLPELLSALHIDPAKSCHLYRLMRLLVHSGFFSTSKSDGEEDVGYDLTPSSRLLLKNNIPSLSSYAQLLLHPVMVHSSESLGDWFRSNEPTPFHTAHEVGLWEYISQNQEFNRFFNESMIGDSSMMDLVIKDCKSVFEGFDTLVDVGGGNGSVARIISESLPHLQCIVLDLPHVVQNLQDSGNLKFIGGDMFQSMPPADSFLFKLVLHAYSDEDCVKVLKKCREAIASKGKEGKVIIIDIVINEEKDEADLKDAKLFFDAFMMAVVTGREREEKEWEKLFLEAGFSHYKITPVFGLRSLIEVYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01059 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 354 IPR029063 -
Accr5g01059 355 FunFam O-methyltransferase ZRP4 107 355 - -
Accr5g01059 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Accr5g01059 355 Pfam O-methyltransferase domain 131 337 IPR001077 GO:0008171
Accr5g01059 355 PANTHER O-METHYLTRANSFERASE 13 340 IPR016461 GO:0008168
Accr5g01059 355 Gene3D Vaccinia Virus protein VP39 107 355 IPR029063 -
Accr5g01059 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Accr5g01059 355 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
Accr5g01059 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Accr5g01059 355 Gene3D - 2 105 IPR036388 -
Accr5g01059 355 SUPERFAMILY "Winged helix" DNA-binding domain 9 109 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01059 Accr-Chr5 36177657 36178856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01059 30 353 Monolignol Biosynthesis Gene Families AT5G54160 33.133 2.42e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01059 K22588 - qsu:112018723 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01059 5 36177657 36178856 Accr5g01059 5 36177657 36178856 ECH