Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01052 ATGAACGATCGTATTTCTAACCATATTGCCTATGATTTGGTTATGCTTGGCCTATCAATATCCCTCCTAGTCCTCGGCATAATCCTCTTCCTCGCCTGCAAAAAGAAACCGGTACAATCAGAAGAATCCCTCCCTGTAAAAATCTGTGCTCGTTCATACCCATTAACCTACATCGACGCCGCCACCGACGGCTTCAACCACCGTAGAATCGTTGGCAAGGGCCGACTTGGAATCGTGTACGCCGGCTTACTCGACAAAGAAGAACTCATAGCAGTCAAAAGGATTCACCCATGGCTTGTCCTTAGCAACGCAGGATTCGGATTCTCCTCAGTGATGAAATGGCTCTCATCAGCTCAACACCCAAACATAGTTCCGATCACCGGTTTCTCAGAAGCCGCCGGCGAGAGAATCATACTAAGTCAATTCGTGAGAATGGTCAGCCTCGACTTCTATCTTCATCAAAACCCAAGCGGGGCTTCACTTTTGGATTGGACAAAGAGGTTAAGAATCGCAGCAGGAACAGCAAGAGGGCTCCAATATCTTCACGAAGTGGCAGCACCAACCATAGTTCATGGCTGTGTTAAGTCATCGAACATCCTCATCGACGTAAACTTCTGTGCAAGAATCTCAGACTATGGACTAAACTTTCTGGCACCAAAAGAGAAAAAAGGAATAGTGGGATATGTGGATGAAGAGTATTGGGATGATAATCAAAAACTTGGTGGTGGTGCTTGTAAGGAAAGTGATGTGTATGGATTAGGTGTGGTTTTGTTAGAGGTTTTAAGTGGAAGAAGCTGTGACGAAGGTTTGTTGGTGAAATGGGCAGTGCCATTAATAAAAGGAATGAGATATAGTGAAGTGTTGGATCCAAGATTGGTGATTCCTTCAGATTTAAAGCCACTTGTCAGATTAGCTAAAGTTGCTTTGGCTTGTGTGGCTAATTCTAGGGAATGTAGGCCTTCCATTGCTCATGTAGCAACCATTTTGAACAATTTAGAGGTTGATGTATGCATGTGA 1017 0.4435 MNDRISNHIAYDLVMLGLSISLLVLGIILFLACKKKPVQSEESLPVKICARSYPLTYIDAATDGFNHRRIVGKGRLGIVYAGLLDKEELIAVKRIHPWLVLSNAGFGFSSVMKWLSSAQHPNIVPITGFSEAAGERIILSQFVRMVSLDFYLHQNPSGASLLDWTKRLRIAAGTARGLQYLHEVAAPTIVHGCVKSSNILIDVNFCARISDYGLNFLAPKEKKGIVGYVDEEYWDDNQKLGGGACKESDVYGLGVVLLEVLSGRSCDEGLLVKWAVPLIKGMRYSEVLDPRLVIPSDLKPLVRLAKVALACVANSRECRPSIAHVATILNNLEVDVCM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01052 338 SUPERFAMILY Protein kinase-like (PK-like) 42 329 IPR011009 -
Accr5g01052 338 FunFam serine/threonine-protein kinase-like protein ACR4 32 142 - -
Accr5g01052 338 Gene3D Phosphorylase Kinase; domain 1 31 142 - -
Accr5g01052 338 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Accr5g01052 338 Gene3D Transferase(Phosphotransferase) domain 1 145 336 - -
Accr5g01052 338 PANTHER OS01G0253100 PROTEIN 48 332 - -
Accr5g01052 338 ProSiteProfiles Protein kinase domain profile. 65 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01052 338 Pfam Protein tyrosine and serine/threonine kinase 68 327 IPR001245 GO:0004672|GO:0006468
Accr5g01052 338 FunFam Receptor protein kinase CRINKLY4 144 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01052 Accr-Chr5 36080891 36082189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01052 50 330 Receptor kinase-like Gene Family AT3G59420 37.966 2.85e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr5g01052 PK_Tyr_Ser-Thr 3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01052 - - vun:114187437 520.005