Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01047 ATGGAGGCCGAGTCTGCTTCAGACGGCGAGAATAATCGGAAAAGGGACGCCGCTGATGATTACAATGACGAAAATAATGGAAGTAACAAAAAAATTGTAAATTCCAATGAAGGCCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGATACCCTAGAGAAAGCTTATGCTTTGGAGACGTACCCGTCGGAGGCGATGAGGGCAGAGCTGTCGCAGAAGCTGGGGCTGTCGGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACGCTCCGAAGTATCCAAGAAAGGCGCCACCGCCGTTGCCCGCTTCACCGACGGACGACTTGAGGATGGAGACTGAACTCGCCAATGATTATGGATCCGGGTCGGGTTCGGGCTCAAGCCCGTTCACGCGTTCAGAGTTGCGGAATGTAGTACCTAGGGGTGTTCCTGGGTACTATGAGTCGCAGCAGGCGCTTATGGAGCTCAGAGCAATTGCTTGTGTGGAGGCACAATTAGGAGAACCCTTGAGGGAGGATGGACCTATTTTAGGAGTGGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCAATAGCAGTTACTGATCAGCAGAAGCGGCCTAGCCTTGGCTTTGATAGTAAAGTCTATGAAAGACATGATGCTAGATCAAACAAGGCTACAAGGGCTTTCAATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGACACAAGCTCATTTACTTGATCCGATGGATGGTCCGGCCAGAACCCCATCTTTTGTGGTAAAAAATGAACTCTCCAGGATTCATGCTGCCCAAGGTCATTCGGCACGTGTCCGTATTCCATCACTACAAGATAAACAAGGACCTCCATTTCAATCACCCACTCGTGATGATGATGGCCCCTCTCAAAGGGAACCTTACACAAATCTAAATATTGGAATGAACTCTCACTTTGCTGATCACCCAATTGTTGGACCAGAAAACCCTTATTCTGCAGTTGGTGGGCCAATTTTCCATGGCGATGCAGTATTACGGGTGGACAGGAAACGAAAGAGTGATGATTCTAGAACTGCAAGAGATGCTGAAGCCCATGAAATGAGGATCCAGAAGGAGATAGAGAAACAAGATAACATTCGGCGAAAGAATGAAGAAAGAATGAGGAAAGAGATGGAGAGGCAAGATCGAGAAAGAAGGAAGGAAGAAGAGAGGTTAATGCGTGAGAGGCAAAGAGAAGAAGAAAGAACAAAGCGTGAACAAAGACGTGAAATTGAACGAAGGGAAAAGTTCCTGATGAAAGAAAATCTAAGAGCTGAGAAAAAGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAGTGGCCCGCAGAATAGCTAAAGAGTCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCTGTGGCAAGCAAGGGACTTCCCTCAATTATAAATCTCGACCTTGACACTTTGCAAAACCTTGACATGTTTCGTGATTCATTATGTATTTTTCCACCCAAGAGTGTAAAGCTGAAAAAACCTTTTGCCATCCAACCCTGGATCAAATCTGAGGATCTTGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACGTTTGCAGATGTCCTTGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTGAAGGTGATAATAAAGGACATTGAAGATGTTGCTAGGACACCTACAGGATTAGGTACAAGCCAGAATGGGGCCGCTAATCCTGGGGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTCGCATTATCTGCAGGGTTTGGACCACGGCTGAAGAAAAGAAATATCACATGGTCCTATGCAAATGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCAGCTGCTGAAAATGCAGTTGCAAAAATGCAAGAGAAAGGTCTATTAGCCCCTCGAAGAAATAGGCACCGGTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTTTGTCTCTAGAGGGGAGCAAGGGGTTGACAGTACTAGAGCTTGCGGAAAAAATTCAGAAATCTGGACTTCGGGACCTGACAACCAGCAAGACGCCTGAGGCATCAATTTCTGTTGCTTTAACTAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCCTCAACTTATCGAGTTCGAGCTGCGTATAGAAAAGATCCTGCTGATGCGGAGGCCATACTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTTCTGCTGTTGAAGATGCTGATGATGTTGAAAGGGAAGAAGAGTCGGAAAGTGATGAAGTTGATGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTTAGTGATAACAAAACATCTGAACAATATGATGACCTGAACATCTGCTCTATAAATGCAAGAGAAAATATGAGCCATGACATTGAAGTTATTCAAAATGAGTTTGGCAAGGATCTTCCTTGTGTTACTGAGAATTGTTCCAAGGATGCTGATTTTCCAAGTGCCATCACTGGACAGCACGGGGTTGTTGGAGATTTGAATACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCATGGGTTCAAGGTCTTACGGAAGGAGAATATTCTGACCTTAGTGTAGAAGAACGCCTTAATGCTCTAGTAGCTTTAGTTGGTGTTGCAAATGAAGGAAATTCAATACGTCTTGTTCTTGAGGACCGATTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAAAGATGATAATTGTAATAAATCTGATTTTCCATCTCTTACTGCAAATAAAGTCGAGACACAATATACAGGCCCTGCTGCAGAGGGAAATCAGAGCCCGTTGCCTGACATCAATATTAATAATAATGAGGCATCACCCATCACTGCAGAAAATCAAAAAGAAGTTCTCGGTGCACAGAATATGCCTATTGAAAAGCCCTCAGTTGTTCCAGATCTCTTTGTGGGTCCAGACAACTTACAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCGCATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAACCGATATTGGCAATTTGTCGCATCTGCTTCTGGCAGTGATCCTGGTGCTGGCAGGGTCTTCACTGAATTACATGACGGCAGCTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGCACTTTTGACATCCCTTGATTCACGTGGAATTAGAGAATCTCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTAGAAAGAATGCTCAATTTAACAAAATTGCTACCAAATCAATTAAAAATGAAGTTGATGAAGTGGAACTAGTTCCCGAATGCCGTGCTGGATCAGACAGTTCTTGCAGTACTCTTTGTGGTTTGAATTCTGACAGTACATTGGAAACTTCTTCGTCCTTTAAAATTGAGCTGGGGGGAAGTGAGAGTGAAAAAAAAGCTGCCTTGAGAAGGTATCAAGATGTTCAAAAGTGGATATGGAAAGAATGTTATAATTCATCAACGTTATATTCAATGAAATATGGGCAAAGGAGATGCAAACCACTGCTGGAAATATGTGACATGTGTTTGAATCCGTACTTCTTTGAAGATTCCCATTGCAATTTTTGCCACCAAACTTTTGCTACTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGAGAAGTTTGATTCCAAAGGTATTTTTACTTGGGATTCTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGCCTTGTTGGCCTGTATTGAGGCTTCTGTTCCTCTTGAAGCATTACAATCAATTTGGACAGAAGAGAATAGGAGGCAGTGGGGAGTGAAGTTAAACAAATCTTCTACAACTGATGAACACTTGCAGTTGCTGACCTTGTTGGAGAGAGCAGTACAGCGAGACTTCCTGTCATCAAACTTCTCTACGGCAGATGAAATGTTGGGATCAAGCTCTATGCCAGATGATGCTGTAAATGCTTCTACTGATAGTGAATCAGTTCCTGTGCTGCCATGGGTACCACAAACCACTGCAGCCATTTCATTGAGAATCTTTGAGTTTGATGCATCCATCAGTTACATACCAGTTGAGACACCTGAGCTACCTTGTGAAGAGAAAGAAGCGAGTGAATATGTGAAGCTCCCTTCAAGATATGCTCCCTTCAAATCTGGTAGAGCTATTGAATCAGCAGAATTAGACCATGATGAATTCATCAAGGAAGACAAATCTAATAGAAGTGTTCGAGGCAGCCATAAACGTGGACGAGGGTCTCATGATCAGGGGCGGGGCAAAAAGTTGGCTAGAAGGACACAACATACCGGGCGTCGAAATGCTAAAGGCGCTGAGAATTTGGGTCGAGGATTAAAGCAGCAGGGGAGAGGGACACAAGGACAAGCTGGTGGACGTGGTCGCCGAACAGTCAGGAAAAGAAGAGTGGAAAAAAGGGCCGTGGAGGACTTATTACTGGGCCACAAGGGTGCTGGTCGAAGTCCCAAGATAAGTGCAGAATCGTTGAGAAGTTTGGAAGAGGAATGGGACGGCGAGAAGGAATCAAGTCCCATCCAAATGGATGGTGTTGATAATAGTAACAGTGCTGATGAAGTGGAATCTGATGACAATGGGCAAGCAGTGGAGTATGATGAGCAAGGAAACTGGGAGGTGGGTTTCAATGGTGGTAGTTCCAACAGATGGGATACGGATATGGTTGAAGCGAGCGATGAAGAAGTGGTGGGTGCTTCTGAAGATGACAATGGCATTGAAGAGGGAGAAGAGGAGTTGGAAGAAGATTCAGAGGAAGAGGCTATGAGTGAGGGAGAGGATTCAGATGGTGAGGGCAATAATAGAATGATGGTAAATGATGAAGAAGAAGAAGGCTCAGACTCAGCTGTCTCTGAGGATTCTGATTAG 5247 0.4374 MEAESASDGENNRKRDAADDYNDENNGSNKKIVNSNEGQSKPKRQMKTPFQLDTLEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDAPKYPRKAPPPLPASPTDDLRMETELANDYGSGSGSGSSPFTRSELRNVVPRGVPGYYESQQALMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIAVTDQQKRPSLGFDSKVYERHDARSNKATRAFNEYPFLPNHSSIRSDAYGQLTQAHLLDPMDGPARTPSFVVKNELSRIHAAQGHSARVRIPSLQDKQGPPFQSPTRDDDGPSQREPYTNLNIGMNSHFADHPIVGPENPYSAVGGPIFHGDAVLRVDRKRKSDDSRTARDAEAHEMRIQKEIEKQDNIRRKNEERMRKEMERQDRERRKEEERLMRERQREEERTKREQRREIERREKFLMKENLRAEKKRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLDTLQNLDMFRDSLCIFPPKSVKLKKPFAIQPWIKSEDLVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTSQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQFALSAGFGPRLKKRNITWSYANDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFSAVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDLNICSINARENMSHDIEVIQNEFGKDLPCVTENCSKDADFPSAITGQHGVVGDLNTGNPEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIDKVRQKDDNCNKSDFPSLTANKVETQYTGPAAEGNQSPLPDININNNEASPITAENQKEVLGAQNMPIEKPSVVPDLFVGPDNLQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASGSDPGAGRVFTELHDGSWRLIDSEEDFDALLTSLDSRGIRESHLRLMLQKIENSFKENVRKNAQFNKIATKSIKNEVDEVELVPECRAGSDSSCSTLCGLNSDSTLETSSSFKIELGGSESEKKAALRRYQDVQKWIWKECYNSSTLYSMKYGQRRCKPLLEICDMCLNPYFFEDSHCNFCHQTFATNNGFNFSKHAFQCGEKFDSKGIFTWDSSLPLRIRLLKALLACIEASVPLEALQSIWTEENRRQWGVKLNKSSTTDEHLQLLTLLERAVQRDFLSSNFSTADEMLGSSSMPDDAVNASTDSESVPVLPWVPQTTAAISLRIFEFDASISYIPVETPELPCEEKEASEYVKLPSRYAPFKSGRAIESAELDHDEFIKEDKSNRSVRGSHKRGRGSHDQGRGKKLARRTQHTGRRNAKGAENLGRGLKQQGRGTQGQAGGRGRRTVRKRRVEKRAVEDLLLGHKGAGRSPKISAESLRSLEEEWDGEKESSPIQMDGVDNSNSADEVESDDNGQAVEYDEQGNWEVGFNGGSSNRWDTDMVEASDEEVVGASEDDNGIEEGEEELEEDSEEEAMSEGEDSDGEGNNRMMVNDEEEEGSDSAVSEDSD 1748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01047 1748 ProSiteProfiles DDT domain profile. 549 608 IPR018501 -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 832 855 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 27 47 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1721 1735 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 285 319 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 361 380 - -
Accr5g01047 1748 CDD homeodomain 43 97 IPR001356 GO:0003677
Accr5g01047 1748 Gene3D - 25 100 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 385 433 - -
Accr5g01047 1748 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 980 IPR028942 -
Accr5g01047 1748 Coils Coil 391 476 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1684 1720 - -
Accr5g01047 1748 Pfam HB1, ASXL, restriction endonuclease HTH domain 731 799 IPR007759 GO:0006355
Accr5g01047 1748 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1517 1748 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1517 1546 - -
Accr5g01047 1748 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Accr5g01047 1748 SMART HOX_1 40 102 IPR001356 GO:0003677
Accr5g01047 1748 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 20 1746 IPR044977 GO:0006357
Accr5g01047 1748 MobiDBLite consensus disorder prediction 830 864 - -
Accr5g01047 1748 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Accr5g01047 1748 SUPERFAMILY Homeodomain-like 32 97 IPR009057 -
Accr5g01047 1748 Pfam DDT domain 551 605 IPR018501 -
Accr5g01047 1748 ProSiteProfiles HARE-type HTH domain profile. 731 800 IPR007759 GO:0006355
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1 51 - -
Accr5g01047 1748 Coils Coil 1699 1719 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 98 117 - -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1 26 - -
Accr5g01047 1748 SMART testlast3 549 608 IPR018501 -
Accr5g01047 1748 MobiDBLite consensus disorder prediction 1616 1633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01047 Accr-Chr5 36024065 36033221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01047 4 1670 Homeobox Transcription Factor Family AT1G28420 49.166 0.0 1350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr5g01047 WSD 3.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01047 - - gmx:100777465 2142.85