Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01012 ATGGCTCCCAGGGAGAAGCCTGCCGCCGTCAAATCTAACCCCCACCTCGGTCTCAAGGAGGTGCATTTCAGGGGCGTTAGGAAGAGGCCTTGGGGAAGATACGCCGCTGAGATTAGAGATCCTGGCAAAAAGAGCCGTGTTTGGCTCGGCACTTTTGATACCGCTGAGGAGGCTGCCCGTGCCTACGACGCTGCCGCTCGGGAGTTCCGTGGGGCCAAGGCCAAAACCAACTTCCCTTACCCTTCTCACAATGGCAACCACCAAACTAGTCCGGCTCAGAGCAGTACGGTCGACTCTTCCAGCCGTGACCGTGAGCCTGCTCCTAAGACGGATTCCTCGTCCTTCGACCTCAACTTGTCCTCCCACGCTTGCGGATCTGTCACCAGCTCCGTCCGCTTCCCTTTCCAGCAGCAGTTCCCGTTGCCGGCTGCCGTGTTTCCTGGCACTCTTCCGCAGGTGAATCAGGCGTTTTACTTCGACGCGGTCTTCCGCGCGAGCATGGCGGCGGGTCAGGCCTTCCATGGAATCATGTTCGATCAGCGCCGTTCCTCGGCGGGTGAGTATCGCTCCGGCGGAGTGCAGAGCGATTCCGATTCCTCCACGGTGATCGATCTAAACGTCCGCGATGACGAGAAGACTCCTCCGAAGGTGCTGGATCTCGATCTCAACGAACTTCCTCCGAAGGAAATGGCGTAA 696 0.5891 MAPREKPAAVKSNPHLGLKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPYPSHNGNHQTSPAQSSTVDSSSRDREPAPKTDSSSFDLNLSSHACGSVTSSVRFPFQQQFPLPAAVFPGTLPQVNQAFYFDAVFRASMAAGQAFHGIMFDQRRSSAGEYRSGGVQSDSDSSTVIDLNVRDDEKTPPKVLDLDLNELPPKEMA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01012 231 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Accr5g01012 231 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Accr5g01012 231 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Accr5g01012 231 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Accr5g01012 231 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Accr5g01012 231 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 178 - -
Accr5g01012 231 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Accr5g01012 231 MobiDBLite consensus disorder prediction 187 202 - -
Accr5g01012 231 MobiDBLite consensus disorder prediction 79 101 - -
Accr5g01012 231 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Accr5g01012 231 MobiDBLite consensus disorder prediction 203 231 - -
Accr5g01012 231 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Accr5g01012 231 MobiDBLite consensus disorder prediction 75 115 - -
Accr5g01012 231 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Accr5g01012 231 MobiDBLite consensus disorder prediction 186 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01012 Accr-Chr5 35811029 35811724 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01012 19 227 AP2-EREBP Transcription Factor Family AT5G44210 41.315 5.75e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01012 AP2 3.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01012 K09286 - jre:108983254 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01012 5 35811029 35811724 Accr5g01012 5 35811029 35811724 ECH
Accr1g02930 1 66147300 66147938 Accr5g01012 5 35811029 35811724 ECH