Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01010 ATGACTTCTTCTTCGTCTTCGCCATCGCCTTCTTCTTCCATGTCGCGCGAGGGTCACTACAGAGGGGTAAGAAAGAGACCGTGGGGACGATACGCCGCCGAGATTCGCGACCCCTGGAAGAAAACGCGCGTTTGGCTCGGCACGTTCGACACGCCGGAAGAGGCAGCGCTGGCCTACGACGGTGCTGCCCGTTCCCTCCGTGGCCCGAAGGCTAAAACCAACTTCCCTGCGGCTCCTGTGGCCACCGGAGGTCTTTCCCTCGACCTCAACGCCCCGACCTCGGATCATCGCTGGCCCCCCATCCCCTCTGGTCGCCTCGTGCTGAACGAGCTTCTCCATGCGGGTGTTCTCAAGGACGTGTCCTTCGATCATCCTCCGCCCTCGCCTGCACCACCCATTTCCATGGCTCACAACCGGCGTGACGGTTCTGTCTCCGTGGATGGTGGTGGCCATCATCAGATGCCGGAGAGCTCTCCCACGGCTTCATTCCTCGGTCTTGTTCGGCGAGGCCTGCCGATCGACTTGAACGAACCTCCTCCTGTGTGGCCTTGA 552 0.6178 MTSSSSSPSPSSSMSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPAAPVATGGLSLDLNAPTSDHRWPPIPSGRLVLNELLHAGVLKDVSFDHPPPSPAPPISMAHNRRDGSVSVDGGGHHQMPESSPTASFLGLVRRGLPIDLNEPPPVWP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01010 183 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Accr5g01010 183 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 125 - -
Accr5g01010 183 MobiDBLite consensus disorder prediction 1 22 - -
Accr5g01010 183 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Accr5g01010 183 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Accr5g01010 183 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Accr5g01010 183 MobiDBLite consensus disorder prediction 1 16 - -
Accr5g01010 183 FunFam Ethylene-responsive transcription factor 2 19 77 - -
Accr5g01010 183 MobiDBLite consensus disorder prediction 123 159 - -
Accr5g01010 183 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Accr5g01010 183 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Accr5g01010 183 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Accr5g01010 183 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01010 Accr-Chr5 35770874 35771425 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01010 11 182 AP2-EREBP Transcription Factor Family AT1G28360 47.549 3.73e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01010 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01010 - - cam:101504196 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01010 5 35770874 35771425 Accr5g01010 5 35770874 35771425 ECH