Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01002 147 Gene3D - 66 132 IPR036893 GO:0003677|GO:0005634
Accr5g01002 147 SUPERFAMILY SBT domain 69 145 IPR036893 GO:0003677|GO:0005634
Accr5g01002 147 Coils Coil 143 147 - -
Accr5g01002 147 FunFam Squamosa promoter-binding-like protein 14 62 132 - -
Accr5g01002 147 MobiDBLite consensus disorder prediction 17 38 - -
Accr5g01002 147 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 51 146 IPR044817 GO:0003677
Accr5g01002 147 MobiDBLite consensus disorder prediction 1 16 - -
Accr5g01002 147 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Accr5g01002 147 MobiDBLite consensus disorder prediction 1 51 - -
Accr5g01002 147 Pfam SBP domain 71 144 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01002 Accr-Chr5 35689569 35690985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01002 58 147 SBP-box Gene Family AT2G33810 67.778 3.18e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr5g01002 SBP 7.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01002 - - pcin:129285669 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01002 5 35689569 35690985 Accr5g01002 5 35689569 35690985 ECH
Accr1g02937 1 66195079 66195865 Accr5g01002 5 35689569 35690985 ECH