Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01001 ATGTTGGGTAACTGTGAGAAAATGGTGGTCATGCCCCCAACAACGGATAACGAATGGCCACAGATTGTTGATCATCATCAGAAGATCTCGTCCTCGTCGATGGGTTCCGGTGGGAGGACGGCGACAATGGAGAAACCTTCCGGTCAGGAGCAACAATCTCTCAAGTGTCCTCGTTGTGAATCAACCAACACTAAGTTCTGCTATTACAACAACTATAGCTTGTCTCAGCCCAGACACTTCTGCAAATCCTGCAAACGATATTGGACCAGAGGAGGTACTCTGAGAAATGTTCCTGCGGGAGGTGGTTGCCGGAAGAACAAGCGCGTGAAGCGTCAAACGCCTTCTTCTGCTCCTGATCACACCACCACTCCTTCTTCTTCATCTTCTCCTAGTGCTGCTAATAATTCAAGCCTTCCTTCTCATCAACCCCACATCGATGCTCATCATGTCCCTCCTCTGTTCTATGGGTTACCACCTGGTAACTCTTTTAATTCTGATATGAATCTTGCGTTCCCAAGGTTCAATAATTCTGGATCGTACGATCATCTGAATTCCCTGGGATTGGCTAGTTTTTCATCTGGGTATACCTCAAACGATTCACTTTTCTCGAATTACAATTCCATATTTGGTGGTTCTTCTTCAACTGCCATATCTTCCCTGTTATACCCTAGTAGTACTAATCCGCAGCAACAGAAGCTCATCAATGGAGGCTTGAAGGATGATGTTTTAGGCACTAATAACACTTTCCAGGGCCTGTTAGATCCATTGGAAGATCAGGTGAAAGTGGATGTAGAAAGACCAAACCAGATCATGGAACATGGGAGCTTGTTCGATTTCTATTCACCTTATTATTGGAATGACCAAACTAATAATGTCGGTCCTTCAGTCACTTCCATGATCGAGTAA 906 0.4481 MLGNCEKMVVMPPTTDNEWPQIVDHHQKISSSSMGSGGRTATMEKPSGQEQQSLKCPRCESTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPAGGGCRKNKRVKRQTPSSAPDHTTTPSSSSSPSAANNSSLPSHQPHIDAHHVPPLFYGLPPGNSFNSDMNLAFPRFNNSGSYDHLNSLGLASFSSGYTSNDSLFSNYNSIFGGSSSTAISSLLYPSSTNPQQQKLINGGLKDDVLGTNNTFQGLLDPLEDQVKVDVERPNQIMEHGSLFDFYSPYYWNDQTNNVGPSVTSMIE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01001 301 MobiDBLite consensus disorder prediction 115 142 - -
Accr5g01001 301 MobiDBLite consensus disorder prediction 95 151 - -
Accr5g01001 301 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 210 IPR045174 GO:0003700|GO:0006355
Accr5g01001 301 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Accr5g01001 301 MobiDBLite consensus disorder prediction 29 53 - -
Accr5g01001 301 Pfam Dof domain, zinc finger 52 108 IPR003851 GO:0003677|GO:0006355
Accr5g01001 301 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01001 Accr-Chr5 35660586 35661671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01001 1 157 C2C2-Dof Transcription Factor Family AT1G28310 50.000 1.66e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr5g01001 zf-Dof 8.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01001 - - pcin:129304804 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01001 5 35660586 35661671 Accr5g01001 5 35660586 35661671 CCT
Accr5g01001 5 35660586 35661671 Accr5g01001 5 35660586 35661671 ECH