Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01000 ATGAACAACAGTAAGCCTCAGGCTCCGCCACAGCAACCCCAGAAATGTCCTCGGTGTGATTCTCTCAACACCAAGTTCTGTTACTACAACAACTATAGCCTCTCCCAGCCTCGTTACTTTTGCAAGGCCTGTCGACGGTACTGGACACAAGGCGGAACCTTGAGGAGCGTCCGCGTCGGCGGTGGCTGCCGCAAGCCCAAGCGAACCAAAGGAAGTTCTTCCTCTTCCGCCGACGCTACTTCCGCCCCGTTGCGAGAGGCAGAGTTTCAGAGCGAACCTTCCACCGCGAGTTCTACTTCTGCTTCTGCTGCTGCTACTTTGGCGGTCCCATCAATTAGCCCCTTTTATCAAGGCGGTGCATGTGCTGGTGGTGGCAGTGGGTATTTGTCGTCCCTGGCGGCGATTCAATCCCTGAATCCATCACAGCCGTTCAATCAGATGAGTCTTCTTTCTGGGTTCGGTGGTGCTGATATTCCTTTGGGCTCATCATCAATACGGCCGCCGCAACCGTTTTATCAGATGAGTAGTATCAGAGACAAGGAAGAAGAGACGACTGATCTGTATGAAGCAGACCAAGTTTTGATTCAGTCAACCACGGCGAGTAGTGGTTCTGCTTCAACTCATAACCATGATGTTTGGTCTGAAAGCTTCATCAACAACGTTAATAACCAGAGAGGATCCGATGGCTCTCTGTGGAGCACCACCATGAGTATCGTTTCCACTAGTGGAAACTCTCAGAGTCATAATAATGATACTGTTGGTGGGTCATTTTCTTTGATCCCGAATCACCAGTGGCCTGATTTTCCTAACTATGACCCTCCTCCATGA 828 0.506 MNNSKPQAPPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRSVRVGGGCRKPKRTKGSSSSSADATSAPLREAEFQSEPSTASSTSASAAATLAVPSISPFYQGGACAGGGSGYLSSLAAIQSLNPSQPFNQMSLLSGFGGADIPLGSSSIRPPQPFYQMSSIRDKEEETTDLYEADQVLIQSTTASSGSASTHNHDVWSESFINNVNNQRGSDGSLWSTTMSIVSTSGNSQSHNNDTVGGSFSLIPNHQWPDFPNYDPPP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01000 275 MobiDBLite consensus disorder prediction 241 259 - -
Accr5g01000 275 MobiDBLite consensus disorder prediction 241 275 - -
Accr5g01000 275 MobiDBLite consensus disorder prediction 68 97 - -
Accr5g01000 275 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Accr5g01000 275 Pfam Dof domain, zinc finger 12 68 IPR003851 GO:0003677|GO:0006355
Accr5g01000 275 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 203 IPR045174 GO:0003700|GO:0006355
Accr5g01000 275 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Accr5g01000 275 MobiDBLite consensus disorder prediction 59 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01000 Accr-Chr5 35638011 35638838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01000 16 165 C2C2-Dof Transcription Factor Family AT4G21050 45.860 1.99e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr5g01000 zf-Dof 6.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01000 - - pcin:129305063 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01000 5 35638011 35638838 Accr5g01000 5 35638011 35638838 CCT
Accr5g01000 5 35638011 35638838 Accr5g01000 5 35638011 35638838 ECH