Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00990 ATGATGGAAAACATTCTAGGTACTTCGTCCAGAGGCGATAGGAAAATGATAGAGAGGAACCGAAGAAGCCATATGAGGGTTCTTTGCTCTCAGCTTAGCTCACTCGTCCCTCATCAAACCTCCAAGGAGATGATTTCGTTGCCGGATCAGCTGGGTGAAGCCACGAACTACATAAAGAAGCTTCAGATAAAGTTGGAGAAGATGAGGAATAAGAAACTCAGCTTAATGGGAATCAACAATAACGAGCCAAACATTAGTGGGAGGCAAAGTTATAATAATAATAATAATAATAGAGGAATAGTTATGGGGTCGAAATCGCCCAAAGTTGAGATTCACCATATGGGTTCAACTTTGATTGTTTCAGTGATTACTGGCTTGGATTGCCACTTCATTTTCAACGATTTCATTCGTATTCTTCACCAAGAACAAGCTGACGTTGTTAACGCCAGTTACTCAGTCCTTCAGGATACTGTTTTTCACACAATTCACTGTCAGATAGGAGAAAGTAGTAACAGAGCTCAGAGGATATCGGAGAGATTAAAGAGGTTTGTGTCTGGTTCTGGTGGTGCTTTTTGA 576 0.4097 MMENILGTSSRGDRKMIERNRRSHMRVLCSQLSSLVPHQTSKEMISLPDQLGEATNYIKKLQIKLEKMRNKKLSLMGINNNEPNISGRQSYNNNNNNRGIVMGSKSPKVEIHHMGSTLIVSVITGLDCHFIFNDFIRILHQEQADVVNASYSVLQDTVFHTIHCQIGESSNRAQRISERLKRFVSGSGGAF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00990 191 Gene3D - 8 85 IPR036638 GO:0046983
Accr5g00990 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 74 IPR036638 GO:0046983
Accr5g00990 191 SMART finulus 15 67 IPR011598 GO:0046983
Accr5g00990 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Accr5g00990 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 185 - -
Accr5g00990 191 Coils Coil 51 71 - -
Accr5g00990 191 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00990 Accr-Chr5 35508851 35509819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00990 7 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.560 4.38e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr5g00990 HLH 7.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00990 - - pcin:129305410 202.986