Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00985 ATGATAAAAATGGAAAAAGATTCCAATTCATGGATACGAAGGACGAAATTCTCTCAAACTGTGTGCCACCGATTTGACTCTTCGACAATGAGGATTCCTCCGCCTGAAGCCTTTGCGCGTCCCAATTCCAAATCGAGGCCTTCAGTTTCTTCTAATCTGTGGCATGTCGATGCTCCAAAGATGCATCAAAATCCTAATGTGAAAAAGCCGAGATCTGTATCTCCTTTGCCGGAAACATCAATCACTGACACCTTCCGTGAAGCTAAGCATGAACAGAAAAGGTTCTCCACTCCAGCTCCTCGGAGGAAAGAAGATAAGAGGATCATGGGGAAGGTGTCAAGCAAACACTCTCCTGAAGCCAAATTATCCTTTTTGAAATCGCCAGAAAGTCCAAAATTGTCAGGCTCGAAATCGAGCGGTAGCCTGAAGAACCGGAAGGAATCAGCGTGGACCAAGTATTTTGAGCATGGCGGCGGAAGGGTTACTGCCGTGGAAACTGCAGAAGAATGGACTGTTGATCTTTCTAAGCTCTTTATTGGGCTCAGGTTTGCTCATGGAGCTCATAGCCGACTTTATCGCGGTAATTATAAGGATGAACCTGTTGCAGTGAAACTTATTAGGGTACCAGATGATGACGAAAGCGGAACCATGGCTGGTCGATTAGAGAAACAATTCATTAGAGAAGTCACTCTTTTATCTCGTCTCCACCATGAAAATGTTATAAAGTTTTTAGCAGCTTGCAGAATACCTCCAGTTTATTGTGTCGTCACAGAATTTCTGTCAGAGGGTTCCTTGAGGGCATACTTGCATAGGCTAGATCACAAAACTGTTCCTCTTGAGAAACTAATAACTTTTGCTCTGGAAATCGCCCGTGGAATGGCATACATACACTCTCAAGGTATCATACATAGGGATCTTAAACCAGAGAATGTCCTTATCAGTGAAGATTCTCACCTCAAAATTGCTGATTTTGGCATTGCCTGTGAGGAAGCATACCGTGATGTGTTTACTGATGATCCCGGTACATACCGTTGGATGGCCCCCGAGATGATCAAACGTAAATGCTATGGGAGAAAGGTTGATGTGTACAGTTTCGGGCTCATCCTATGGGAAATGGTGACTGGGACAATACCATATGAGGATATGACTCCTATCCAGGCTGCTTATGCTGTGGTGAATAAGAATTCCAGACCTGTTATTCCTTCAAGCTGCCCACCTGGAATGCGAGCTTTAATTGAGCAATGCTGGTCCTCACATCCAGATAAGAGGCCTGAGTTCTGGCAGATTGTCAAGATATTAGAACAATTTGAGTCTTCGTTTTCCCGTGACGGAACTCTGAAAATTCCGCCAAACTTTTGTTGCCATGACCATAAGAAAGGAATTCTTCATTGGATTCAGAGGCTTGGTCCTGTGCATCAAAATAACGGCCCCATGCCTAAACCGAAGTTCACTTAA 1455 0.4412 MIKMEKDSNSWIRRTKFSQTVCHRFDSSTMRIPPPEAFARPNSKSRPSVSSNLWHVDAPKMHQNPNVKKPRSVSPLPETSITDTFREAKHEQKRFSTPAPRRKEDKRIMGKVSSKHSPEAKLSFLKSPESPKLSGSKSSGSLKNRKESAWTKYFEHGGGRVTAVETAEEWTVDLSKLFIGLRFAHGAHSRLYRGNYKDEPVAVKLIRVPDDDESGTMAGRLEKQFIREVTLLSRLHHENVIKFLAACRIPPVYCVVTEFLSEGSLRAYLHRLDHKTVPLEKLITFALEIARGMAYIHSQGIIHRDLKPENVLISEDSHLKIADFGIACEEAYRDVFTDDPGTYRWMAPEMIKRKCYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAYAVVNKNSRPVIPSSCPPGMRALIEQCWSSHPDKRPEFWQIVKILEQFESSFSRDGTLKIPPNFCCHDHKKGILHWIQRLGPVHQNNGPMPKPKFT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00985 484 SMART serkin_6 177 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00985 484 Gene3D Phosphorylase Kinase; domain 1 165 260 - -
Accr5g00985 484 PRINTS Tyrosine kinase catalytic domain signature 360 382 IPR001245 GO:0004672|GO:0006468
Accr5g00985 484 PRINTS Tyrosine kinase catalytic domain signature 295 313 IPR001245 GO:0004672|GO:0006468
Accr5g00985 484 PRINTS Tyrosine kinase catalytic domain signature 257 270 IPR001245 GO:0004672|GO:0006468
Accr5g00985 484 PRINTS Tyrosine kinase catalytic domain signature 404 426 IPR001245 GO:0004672|GO:0006468
Accr5g00985 484 PRINTS Tyrosine kinase catalytic domain signature 341 351 IPR001245 GO:0004672|GO:0006468
Accr5g00985 484 ProSiteProfiles Protein kinase domain profile. 177 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00985 484 CDD STKc_MAP3K-like 184 433 - -
Accr5g00985 484 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 99 437 - -
Accr5g00985 484 MobiDBLite consensus disorder prediction 28 142 - -
Accr5g00985 484 MobiDBLite consensus disorder prediction 83 114 - -
Accr5g00985 484 FunFam serine/threonine-protein kinase HT1 262 454 - -
Accr5g00985 484 FunFam Kinase suppressor of Ras 1 166 260 - -
Accr5g00985 484 Gene3D Transferase(Phosphotransferase) domain 1 261 448 - -
Accr5g00985 484 MobiDBLite consensus disorder prediction 67 81 - -
Accr5g00985 484 Pfam Protein tyrosine and serine/threonine kinase 183 433 IPR001245 GO:0004672|GO:0006468
Accr5g00985 484 SUPERFAMILY Protein kinase-like (PK-like) 161 433 IPR011009 -
Accr5g00985 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00985 Accr-Chr5 35352264 35354745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00985 4 484 MAP Kinase Kinase Kinase AT5G58950 53.992 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr5g00985 PK_Tyr_Ser-Thr 2.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00985 - - gmx:100784454 702.205