Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr5g00969 | ATGGCCTTTGAGCACTACATTTCACAAGAATGGAAAAGCATTCCAAGTTCCATGACGAAAGAGACTGGAAATCATGATGGTTGTTTCGATTGCAACATTTGCTTTGACTTTGTTATTGAACCTGTGGTCACCCTCTGTGGCCACCTCTATTGCTGGCCCTGCATCTACAAGTGGCTCCATGTCCAAAGTGCTTCTCTTGCATCTGATGAGCACCCACAATGCCCAGTCTGCAGGGCTGATATATGTCCCACCACCTTGGTCCCCCTATACAGCCGGGGCCAAACCCCGGCTCCTCCCGAGCAAGACACAAAGGCATCACGTGAGATTTTGATACCGCCAAGACCACGAGCTTTTGGCGTTCAAGCTCTGATGTTAGCATCATCATCATCATCTCAAGTTGGTCATCATCAGCGTCATCCTTATCATTATCCTCATCACAGTCATCAACATTTCAGCTCTCCTCTGTACCAAGTGGAGGATGCCTCATCACAAGTGCTGAATCTCAGTACTACTCTTACACCTCAAGGATTTCACCACCCTGTGGCTGGGATGGTTTACGCCACGGTGTTTGGCAGCCCAGAAAATATATACGCGTACCCGAATTCTTATCAGCAGATGGGCAGCAGCAGCCCAAGACTGAGAAGGCAGGTGATGCAAGCAGACAAGTCATTGAATAGAATCTCAATCTTCCTCTTTTGCTGTTTTGTTTTATGTCTCATTGTATTTTGA | 729 | 0.4719 | MAFEHYISQEWKSIPSSMTKETGNHDGCFDCNICFDFVIEPVVTLCGHLYCWPCIYKWLHVQSASLASDEHPQCPVCRADICPTTLVPLYSRGQTPAPPEQDTKASREILIPPRPRAFGVQALMLASSSSSQVGHHQRHPYHYPHHSHQHFSSPLYQVEDASSQVLNLSTTLTPQGFHHPVAGMVYATVFGSPENIYAYPNSYQQMGSSSPRLRRQVMQADKSLNRISIFLFCCFVLCLIVF | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr5g00969 | 242 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 8 | 239 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Accr5g00969 | 242 | SUPERFAMILY | RING/U-box | 26 | 90 | - | - | |
Accr5g00969 | 242 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 7 | 108 | IPR013083 | - | |
Accr5g00969 | 242 | ProSiteProfiles | Zinc finger RING-type profile. | 31 | 78 | IPR001841 | - | |
Accr5g00969 | 242 | Pfam | Zinc finger, C3HC4 type (RING finger) | 31 | 77 | IPR018957 | GO:0046872 | |
Accr5g00969 | 242 | ProSitePatterns | Zinc finger RING-type signature. | 46 | 55 | IPR017907 | - | |
Accr5g00969 | 242 | SMART | ring_2 | 31 | 77 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr5g00969 | Accr-Chr5 | 35127223 | 35127951 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr5g00969 | 6 | 228 | C3H Transcription Factor Family | AT4G27470 | 38.428 | 1.10e-41 | 140 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr5g00969 | K10666 | - | qsa:O6P43_031837 | 302.367 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr5g00969 | 5 | 35127223 | 35127951 | Accr5g00969 | 5 | 35127223 | 35127951 | ECH |