Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00968 ATGGCTGAAAGATTAGCAGCAGAGCCGAAGAAGCTCGACAATAACACAGCTGCGGCAACCACCATAGCCTCCGGCGGCCGACGGTGTGTGGCACCGTTTCTGTTGAAGACGTATGACTTGGTGGAAGGAGGAGGAGGAGCCGAAGGCGAGAAAGAAGAAGAAGAAGAAAGGAAGGGATCAGTAATAGTATCATGGAATGAGAAAGGAGATGGTTTTGTAGTGTGGCGTCCTACAGAATTCTCAGAGCTCATATTGCCGACATACTTCAAACACAACAACTTCTCCAGCTTCATCCGCCAATTGAACACCTACGGGTTTAAGAAAGTGTCATCAAAGAGATGGGAATTCAAGCAGGAGAAATTTCAGAGAGGGAAGAAGAAGTTGCTGGCAGAGATAACGAGGAAGAAGTGTGAGCCAAGTGTTTTCCCTTCATACTTGAAGTCTTGTTCTGAGGAAACCAGTAATCATGATCATGATCATGAATCCCTGCTACAGCAGAACCACCACCTGAAGAAGCAGAACCAGCACTTGCAATCACAAGTCGCTCACTTCAAACAATTACAAACCAGGTTGTTGCATTGTGTCTCTCAATATATGGGCACCTCCCCAGATCAATAA 618 0.4612 MAERLAAEPKKLDNNTAAATTIASGGRRCVAPFLLKTYDLVEGGGGAEGEKEEEEERKGSVIVSWNEKGDGFVVWRPTEFSELILPTYFKHNNFSSFIRQLNTYGFKKVSSKRWEFKQEKFQRGKKKLLAEITRKKCEPSVFPSYLKSCSEETSNHDHDHESLLQQNHHLKKQNQHLQSQVAHFKQLQTRLLHCVSQYMGTSPDQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00968 205 FunFam Heat stress transcription factor A-6b 26 136 - -
Accr5g00968 205 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 195 IPR027725 -
Accr5g00968 205 Coils Coil 160 180 - -
Accr5g00968 205 SMART hsfneu3 29 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00968 205 PRINTS Heat shock factor (HSF) domain signature 97 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00968 205 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00968 205 ProSitePatterns HSF-type DNA-binding domain signature. 85 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00968 205 Gene3D - 26 136 IPR036388 -
Accr5g00968 205 SUPERFAMILY "Winged helix" DNA-binding domain 57 135 IPR036390 -
Accr5g00968 205 Pfam HSF-type DNA-binding 33 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00968 Accr-Chr5 35119435 35121122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00968 17 203 HSF AT5G62020 35.747 1.15e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr5g00968 HSF_DNA-bind 2.5e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00968 K09419 - qsa:O6P43_031835 213.772