Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00967 ATGTGGATGTATTATATCCTACCTATTCCAAACATGGCTGAAAGATTAGCAGCAGAGCCGAAGAAGCTCGACAATAACACAGCTGCGGCAACCACCATAGCCTCCGGCGGCCGACGGTGTGTGGCACCGTTTCTGTTGAAGACGTATGACTTGGTGGAAGGAGGAGGAGGAGCCGAAGGCGAGAAAGAAGAAGAAGAAGAAAGGAAGGGATCAGTAATAGTATCATGGAATGAGAAAGGAGATGGTTTTGTAGTGTGGCGTCCTACAGAATTCTCAGAGCTCATATTGCCGACATACTTCAAACACAACAACTTCTCCAGCTTCATCCGCCAATTGAACACCTACGGGTTTAAGAAAGTGTCATCAAAGAGATGGGAATTCAAGCAGGAGAAATTTCAGAGAGGGAAGAAGAAGTTGCTGGCAGAGATAACGAGGAAGAAGTGTGAGCCAAGTGTTTTCCCTTCATACTTGAAGTCTTGTTCTGAGGAAACCAGTAATCATGATCATGATCATGAATCCCTGCTACAGCAGAACCACCACCTGAAGAAGCAGAACCAGCACTTGCAATCACAAGTCGCTCACTTCAAACAATTACAAACCAGGTTGTTGCATTGTGTCTCTCAATATATGGGCACCTCCCCAGATCAATAA 651 0.4547 MWMYYILPIPNMAERLAAEPKKLDNNTAAATTIASGGRRCVAPFLLKTYDLVEGGGGAEGEKEEEEERKGSVIVSWNEKGDGFVVWRPTEFSELILPTYFKHNNFSSFIRQLNTYGFKKVSSKRWEFKQEKFQRGKKKLLAEITRKKCEPSVFPSYLKSCSEETSNHDHDHESLLQQNHHLKKQNQHLQSQVAHFKQLQTRLLHCVSQYMGTSPDQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00967 216 SUPERFAMILY "Winged helix" DNA-binding domain 68 146 IPR036390 -
Accr5g00967 216 SMART hsfneu3 40 146 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00967 216 PRINTS Heat shock factor (HSF) domain signature 95 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00967 216 PRINTS Heat shock factor (HSF) domain signature 108 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00967 216 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 40 206 IPR027725 -
Accr5g00967 216 Gene3D - 37 147 IPR036388 -
Accr5g00967 216 Coils Coil 171 191 - -
Accr5g00967 216 ProSitePatterns HSF-type DNA-binding domain signature. 96 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00967 216 Pfam HSF-type DNA-binding 44 146 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g00967 216 FunFam Heat stress transcription factor A-6b 37 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00967 Accr-Chr5 35119435 35121155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00967 28 214 HSF AT5G62020 35.747 2.33e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr5g00967 HSF_DNA-bind 2.9e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00967 K09419 - qsa:O6P43_031835 213.772