Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00909 ATGGTTATGGATAGTACCGATTCGTGTTCAGGGTATCAGCATCCTCAGCTTCCTCCTGGATTCCGATTTCATCCCACCGACGAAGAGCTCGTCGTTTATTACTTGAAGCGAAAAGCCACCTCTGCTCCGCTTCCCGTTGCCATTATTGCCGACGTTGATCTCTACAAGTTCGATCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCCAGAGATCGCAAGTATCCAAATGGAGCCCGACCAAACAGGGCAGCCACTTCGGGATATTGGAAAGCCACCGGAACCGACAAGCCGATATTGTCTTCGGACGGCCGAAAACAGAAAGTCGGCGTGAAGAAAGCCCTGGTTTTCTACGGCGGAAAACCTCCAAAAGGCGTTAAAACCAACTGGATCATGCATGAATATAGACTCACTGACAACAATTCCTACAATAATAACAATTCTATCCCTAAGCCTCCTCCTCTGGCTTCAGATTCAGCCTCACAATCCGCCAAGAAAAACTCCTTAAGGCTTGATAACTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGTAATATGAATACTGGTTTACAAAGGCCGCCATTAATGGAGCAGGAGAGGGAGATTTGTATGGAGGCTATGATTCCCACAATCTCAAGTTTATCAATGGCTAATGGACTTGAGAATAATGATGACAACTTGTTCAACGGAATTCTGGGAATCGGCGGCAGCGGAGGAGGCTATGGTGGTGGTGAAGAATCTCATCATCACTTGCTGTCGTCAAACTCATCCAAAACAGTGAAACGACCCCTGGCATCGGCGTTTTGGAACGATACGGCGGGGTCACCGTCGGGGTCATCTTCGTCAAGCAAGAGATTCCACGGTGATCTGAACAGTAGTGGGATGAGTACTATCTCGGCCGATGAGAACAGCTCGTTCATTTCTCTGCTAAGCCAGCTTCCTCCTCATAATCAGAATACTACGACGTTTCTTGGCTCCATCAGTGACGGCGTTTTGAGGCAGCAATTTCAGCATCCGAGCATGAATTGGACCTCATAA 1065 0.4798 MVMDSTDSCSGYQHPQLPPGFRFHPTDEELVVYYLKRKATSAPLPVAIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRKQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNSYNNNNSIPKPPPLASDSASQSAKKNSLRLDNWVLCRIYKKSNSNMNTGLQRPPLMEQEREICMEAMIPTISSLSMANGLENNDDNLFNGILGIGGSGGGYGGGEESHHHLLSSNSSKTVKRPLASAFWNDTAGSPSGSSSSSKRFHGDLNSSGMSTISADENSSFISLLSQLPPHNQNTTTFLGSISDGVLRQQFQHPSMNWTS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00909 354 ProSiteProfiles NAC domain profile. 17 190 IPR003441 GO:0003677|GO:0006355
Accr5g00909 354 MobiDBLite consensus disorder prediction 149 172 - -
Accr5g00909 354 PANTHER NAC TRANSCRIPTION FACTOR 56 17 222 - -
Accr5g00909 354 FunFam NAC transcription factor 56 26 195 - -
Accr5g00909 354 Gene3D NAC domain 26 195 IPR036093 GO:0003677|GO:0006355
Accr5g00909 354 SUPERFAMILY NAC domain 11 190 IPR036093 GO:0003677|GO:0006355
Accr5g00909 354 Pfam No apical meristem (NAM) protein 18 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00909 Accr-Chr5 34139668 34140927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00909 7 354 NAC Transcription Factor Family AT1G61110 52.446 1.84e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr5g00909 NAM 3.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00909 - - qsa:O6P43_031801 437.958