Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00899 ATGGGTTCTGGGGATAATAACGAGGATCTTGTCACCAGCTTGCCTAGTCAGCCTCATGCAGATTTCAAGCACTTTGCTGGCTTTGTCACAGTGAACGAAACTAATGGAAGAGCACTCTTTTACTGGTTTTATGAGGCCATCAACAATCCTCAAGAGAAACCCTTAGTGCTTTGGCTTAATGGAGGACCTGGGTGCTCTTCTGTGGGTTATGGAGCAACGCAAGAGATTGGTCCTTTTTTAGTGGACACTAATGGCCAGGGTCTTCAATATAATAACTTCTCATGGAACAGAGAAGCCAACGTTTTATTCGTGGAATCTCCTGTTGGTGTCGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATCTTGGAGATGACTTCACAGCTAACGATGCTTACAATTTTCTGCACATGTGGTTCCTCAAGTTTCCATCTTACAGAACTACTAGGACATTTTACGTAGCAGGAGAGAGTTATGCAGGAAAGTATGTACCTGAGCTTGCTGAGCTCATCGTTGATAGGAACATGGACGCTTCGCTTCATATTAATCTTAAGGGTATCCTGCTGGGTAATCCCGAAACATCTGATGCGGAGGATTGGATGGGTATAGTGGATTATGCTTGGAGCCACGCGGTGATATCAGATGAATTACACAGAGAAATAAGAGAAAGTTGTGACTTCAAAAGTAGTGATCCATGGAAGAACCAAACATGTTGTGATGCTGTTGATGAATTGCTTGCACAGTACCACAAGATTGATATGTATAGTCTTTATACACCTGTCTGCTTCGCCTCTACTGCTTCAAGTTCCAATAATAATCAATATTCTACCCAAGGTTTCATGAGTTATAAACGCACGGTGAAAATGATGCCCAGGATCATGGGTGGTTTTGATCCTTGTTTGGACGATTACGCCACAGCTTTCTATAACAGACCAGATGTTCAGAAGGCTCTTCATGTTAGCAATGGTCATAGCATTAAGAATTGGAGTATTTGCAACTACAATATATTCTACCACTGGAAAGATTCAAAGCCATCTGTTATCCCAATTTACAAAAAGCTTATTTCGGCAGGACTTAGAATCTGGGTTTACAGTGGAGACACAGATGGGAGAGTGCCAGTTCTGTCCACTAGATACAGCTTAAGGTCTCTGAATTTGCGTATCACCAAGACATGGAGACCATGGTATCACGATAACGAGGTAAGTGGGTGGTTTCAAGAATACGAGGGGCTTACTTTTGCAACGTTTAGAGGAGCAGGACATGACGTGCCCAGTTTCAAACCAAGCAATTCGCTTGCATTCTTCTCCTCCTTTCTGCTCGGACAGTCCCCACCAGAAACTAAATAA 1350 0.4281 MGSGDNNEDLVTSLPSQPHADFKHFAGFVTVNETNGRALFYWFYEAINNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGQGLQYNNFSWNREANVLFVESPVGVGFSYSNTTSDYEHLGDDFTANDAYNFLHMWFLKFPSYRTTRTFYVAGESYAGKYVPELAELIVDRNMDASLHINLKGILLGNPETSDAEDWMGIVDYAWSHAVISDELHREIRESCDFKSSDPWKNQTCCDAVDELLAQYHKIDMYSLYTPVCFASTASSSNNNQYSTQGFMSYKRTVKMMPRIMGGFDPCLDDYATAFYNRPDVQKALHVSNGHSIKNWSICNYNIFYHWKDSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLRSLNLRITKTWRPWYHDNEVSGWFQEYEGLTFATFRGAGHDVPSFKPSNSLAFFSSFLLGQSPPETK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00899 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 91 103 IPR001563 GO:0004185|GO:0006508
Accr5g00899 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 166 IPR001563 GO:0004185|GO:0006508
Accr5g00899 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 412 425 IPR001563 GO:0004185|GO:0006508
Accr5g00899 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 104 114 IPR001563 GO:0004185|GO:0006508
Accr5g00899 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 429 IPR001563 GO:0004185|GO:0006508
Accr5g00899 449 Gene3D - 348 442 - -
Accr5g00899 449 FunFam Carboxypeptidase 5 265 - -
Accr5g00899 449 SUPERFAMILY alpha/beta-Hydrolases 7 444 IPR029058 -
Accr5g00899 449 Pfam Serine carboxypeptidase 19 440 IPR001563 GO:0004185|GO:0006508
Accr5g00899 449 Gene3D alpha/beta hydrolase 5 265 IPR029058 -
Accr5g00899 449 ProSitePatterns Serine carboxypeptidases, serine active site. 155 162 IPR018202 GO:0004185
Accr5g00899 449 Gene3D - 301 337 - -
Accr5g00899 449 FunFam Carboxypeptidase 348 442 - -
Accr5g00899 449 FunFam Carboxypeptidase 299 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00899 Accr-Chr5 33994491 33998472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00899 306 443 Calmodulin-binding Proteins AT2G22960 38.129 1.93e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00899 K16297 - gmx:100815993 743.806