Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00898 ATGAAAACTTTCCGCAGATTGGCTCTTGTCCTTGTGCTATTATTATATGTGAAGCCTGTTGTATCATCTTCGAGACACAGGCAATATTATAGGAAGCTGAGTTCTGGGGATGGTAATGATGAAGATCTTGTCACCAACTTACCTGGTCAGCCTCATGCAGATTTCAAGCACTTTGCTGGCTATGTCACAGTGAATGAAACTAATGGAAGAGCCCTCTTTTACTGGTTTTATGAGGCCATCACCACTCCTCAAGATAAACCCTTAGTGCTTTGGCTCAATGGAGGACCTGGGTGCTCTTCAGTGGGATATGGAGCAACACAGGAGATTGGTCCTTTTTTAGTGGACAGTAATGGCCAGGGTCTTAAATATAATAACTTCTCATGGAACAGAGAAGCCAATGTTTTGTTTGTGGAATCTCCTATTGGGGTTGGCTTTTCCTACTCAAACACAACCACTGATTATGAACATATTGGAGATGACTTCACAGCTAACGATGCTTACAATTTCCTGCACAAGTGGTTCCTCAAGTTTCCATCTTACAGAACTAGGACATTTTACATAGCAGGAGAGAGTTATGCAGGGAAGTATGTACCTGAGCTTGCTGAGCTCATCGTTGATAGTAACAAGGACCCTTCACTTCATATTGATCTTAAGGGTATCCTGCTGGGAAATCCAGAAACATCTGATGCTGAGGACTGGAGGGGAATTGTGGATTATGCGTGGAGCCACGCAGTGATATCAGATGAAACATACGTAACAATAAGAGAAAGCTGTGACTTCAAAAGCAGTGATCCATGGAAGAATCAAACTTGTTGTGATTCTGTGGATGAAGTGTTCTCTCAGTACGGCAAGATTGATATCTATAGCATCTATACCTCTGTCTGCTTTGCCTCTACTGCTCGCTCCAATATTGATCAATCTCAATCTCTACAAGGCCGACGCGTCATGAAATATAAACGTTCTTCCAAAATGATGCCGAGGATTATGGGTGGTTATGATCCATGTTTGGATGATTATGCGAGAGCTTTCTATAACAGACCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCATAGTCTTAAGAATTGGAGTATTTGCAACGACAAGATGTTCAACGATTGGGGAGATTCAAAGCCATCCATGATCCCAATTTACAAGAAGCTTATTTCGGCAGGACTTAGAATCTGGGTTTACAGTGGAGACACAGATGGGAGAGTGCCAGTACTGTCCACAAGATACAGCTTAAGCACTCTGAATTTGCGAATCACCAAGCCATGGAGACCATGGTATCACGAGAACGAGGTAAGTGGGTGGTTTCAAGAGTACGAGGGGCTGACTTTTGCGACGTTTAGAGGAGCAGGACATGCAGTGCCTTGCTTCAAACCAAGCAATTCACTCGCACTCTTCTCTTCTTTTCTTGTCGGACAATCCCCACCTTCTACTAAATAA 1452 0.4325 MKTFRRLALVLVLLLYVKPVVSSSRHRQYYRKLSSGDGNDEDLVTNLPGQPHADFKHFAGYVTVNETNGRALFYWFYEAITTPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSNGQGLKYNNFSWNREANVLFVESPIGVGFSYSNTTTDYEHIGDDFTANDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIVDSNKDPSLHIDLKGILLGNPETSDAEDWRGIVDYAWSHAVISDETYVTIRESCDFKSSDPWKNQTCCDSVDEVFSQYGKIDIYSIYTSVCFASTARSNIDQSQSLQGRRVMKYKRSSKMMPRIMGGYDPCLDDYARAFYNRPDVQKALHASDGHSLKNWSICNDKMFNDWGDSKPSMIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLNLRITKPWRPWYHENEVSGWFQEYEGLTFATFRGAGHAVPCFKPSNSLALFSSFLVGQSPPSTK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00898 483 FunFam Carboxypeptidase 38 297 - -
Accr5g00898 483 Gene3D alpha/beta hydrolase 38 297 IPR029058 -
Accr5g00898 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Accr5g00898 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Accr5g00898 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Accr5g00898 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Accr5g00898 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 463 IPR001563 GO:0004185|GO:0006508
Accr5g00898 483 FunFam Carboxypeptidase 332 478 - -
Accr5g00898 483 Gene3D - 335 371 - -
Accr5g00898 483 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Accr5g00898 483 Gene3D - 382 476 - -
Accr5g00898 483 Pfam Serine carboxypeptidase 51 475 IPR001563 GO:0004185|GO:0006508
Accr5g00898 483 FunFam Carboxypeptidase 382 476 - -
Accr5g00898 483 SUPERFAMILY alpha/beta-Hydrolases 40 478 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00898 Accr-Chr5 33941876 33945488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00898 340 477 Calmodulin-binding Proteins AT2G22960 34.532 3.91e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00898 K16297 - gmx:100815993 794.267