Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00868 ATGGACGTTGGATCTATAGTAAGCATCCTGAGCTGCTTGTGCTCTCAGAACTCGTTGCAACAATCTCTTGAACGACGATTTAGGCATCTTGGGAAACCAAGAAAGAATCTGAACAAGCTAAAAGAGTTAGTGGAACAGCTAGATGCTAGGAGATCAGATGTAAACACTAAACTAGATCAAATGTGGCTGGAAAAAGGGATGAATCCACGAGAAGAGGTGAAGCTGTGGATGAAAAGCGTTGATCGAGTTAAAAGCCAAGTGAGCAGCCTCACAGAGTATAACAACAACGGGTGTTCCTTCAACTTTGTTTGTTCACGAATAAAATTCGGAGAAGTAGTAGAAGACAAGATCAGTGAGGTTAAAGAGCTTCTTGACAATGGTCAGTTCTTGGATGATTTAGTGGCTGAAAACTTGCCTCAGGTAGGGTACACTCTTCCTTCGTCGCCATTAATGGAGTGTGACACAACGATGAAGAGTTTAGCAAGGATATTGGAATGCTTATCACAAGAGAGTGTGAAAAGGATTGGAGTTTATGGGATGGGAGGAGTAGGCAAAACAACTATCATGAAAGAAATCCACAATCGTCTTTTAGAAGGGAGAGATTTTGATCATGTCATATGGGTTTCTGCACCAAAAGAGCCAAGTCCTGTGAAACTACAAAAGGGCATTGGAGAGAAGCTGGATTTAGATCTTTCAATGATCGACGATGATGTTACAAGAGCAGTCAAGCTACTTGAGGCTTTAAGCAGAAGGAAGAGATACACATTGATTCTAGATGATTTATGGGAGCAGTTCTCTCTTGAAACGGTTGGAATACCGATACCAACAACAGAGAACGGTTGTAAGTTGGTGATCACTACGCGATTGTTGAGTGTTTGTCGTGGTATGGAGACAGATGAGGATGTAGAAGTGAAGGCCCTTCAAGATGACGAGGCATGGGATCTCTTAAGGTCTAAAGTTGGACCAGTAGTGTCAAATTCTGCAGAAGTTGGGATGATTGCAAAGGAAGTAACAAAAGAATGTGGAGGTTTGCCTCTTGCTATTGTTACAGTAGGACGAGCCTTGAGAAATGCTGCTGACGTATCAGAGTGGGAGTGTGCATTAGATGAGCTAAGAGCTTCAACAGCAAACATTGAAAAGATGGAACAAGCAGTGTTTGCACACTTGAGATTTAGCTATGCCAAGCTAAAGGACGATACAAGCAGGTCTTGTTTCCTCTTTTGTGCTTTATACCCTGAAAGTCACCAAATTGATACCAATGAGCTGATGGAATATTGGATGTGGGAAGGTTTATTGGGTTATGTTGGAGGAATAGCTGCAATGAAGAGGAAAGGGAAAATCATATTGAATGAATTAAAACATGCGTGCTTGTTAGAGGGTCTAACTCAAAATGCGGCGGAATTCATCAAAATGCATGATTTAATACGAGATATGGCTATTACAATCATGAGAACGAATCCTCACTCAATATGTAAAGCAGGGATAGGGATGACAAAACATCAATGGATGGAGGAATGGGCAGAAGATGTTCAAAGGGTGTCACTAATGAGAAACGACTTGAAATGTATTCCCTTCGACTTCAACCTTATGTGGCCTAAACTTACTTCCTTATTGTTGCAATTCAACTCGTTTTCTGAAAATATATCCCGTGAGTTCTTCGAAAACATGCAATTTCTGAAAGTTCTGGACCTTTCCTACACTGGGATTGATTTCTTGCCCGACTCTGTCTCTAATTTAGAGAATCTATCTGCTTTGTTATTGAGCAACTGTTGGAATTTAGCAGCAGTTCCTACGTTAGCAAAACTGAATAAGCTGATGGTCCTTGATCTCTCTTGCTCTCCAAGAATGAAAGAACTTCCAGATGGGATGCAATGGTTGGGAAACTTGAGGCGCTTAAATCTTTCCCAGACTGGAATTGAAATCTTCCCATTTGGATTAATGTCCAAATATACCCTTTTGGAAGACTTACTGATAGGCGGTTGCGGTATCTTGTGGGGATCAACGACAGTCAAAGCCATCAGTGGTGGAGCTTCCATTGAAGAAATCATTTCCTCAAATATATCTTCTCTTGAACTAGACTTATGGAATGCAAATGTGTTTGATCAATATGCCAAATCTGGTCACTGGGTTCAGCTGGATAAGTTCAGGATAACAATTGGGCAGCCCCAAGCACAGTTTTGTGAAGAGAGAAGCTTAGCCTTTAGTGGGAGACTTGTTCTAAGAGGAAACCCAGTTTCTCTACCACCAAACACATTGGAGCTACATTTGGATGACTCTGCTGATATTAAGAATCTAAGTATGTGCTTAGTGAATGTGACACAATTGAAATACTGTAAAATCAGGTGGTGTGATGACATAGAAAGCATAATTGACTCAGAGGAAGAGGAAATTACTTTACCCATGCTAGAAAGGATGGAACTTTTAGTTCTGGGAAACTTGAAGATAATATGTAGGGATGTAGTGAGACCTGGCACTCTTATGAGCTTGAAGATCGTTACTGTGGAATATTGTCCAAAACTGAAGACTCTATTCTCAGGGCAGATTTTGCTTCAACTTAAGAATCTGGAAGAAATTAGTGTTCGTAGTTGTACTGGTATGGAGTGCATAATGAAAGGAGAAGAGGGAGAAAATGATTCAGGAATTGAGTTTCCAAAGTTGAAGAGGATGAAACTGAAGTTCATGCCCCTTTTGGAGAGCATATATGACGGTACCATTCTCTGCCCTTCTTTAAAAAGTCTTGAGGTAGCATCCTGTGAAGCTCTGAAGAAGCTTCCTCTTGGTCTGTCAGCAACACCTGCTCTTGAAGAAATCAGAGCAACCAGAACATGGTGGAACTCATTAGAGTGGGATCAACCTGATTCAAAAAATGTCCTGCAACCTTACCTTGTGGAAACTAGATTGACAAGTACAAGTTACCGATAA 2922 0.4093 MDVGSIVSILSCLCSQNSLQQSLERRFRHLGKPRKNLNKLKELVEQLDARRSDVNTKLDQMWLEKGMNPREEVKLWMKSVDRVKSQVSSLTEYNNNGCSFNFVCSRIKFGEVVEDKISEVKELLDNGQFLDDLVAENLPQVGYTLPSSPLMECDTTMKSLARILECLSQESVKRIGVYGMGGVGKTTIMKEIHNRLLEGRDFDHVIWVSAPKEPSPVKLQKGIGEKLDLDLSMIDDDVTRAVKLLEALSRRKRYTLILDDLWEQFSLETVGIPIPTTENGCKLVITTRLLSVCRGMETDEDVEVKALQDDEAWDLLRSKVGPVVSNSAEVGMIAKEVTKECGGLPLAIVTVGRALRNAADVSEWECALDELRASTANIEKMEQAVFAHLRFSYAKLKDDTSRSCFLFCALYPESHQIDTNELMEYWMWEGLLGYVGGIAAMKRKGKIILNELKHACLLEGLTQNAAEFIKMHDLIRDMAITIMRTNPHSICKAGIGMTKHQWMEEWAEDVQRVSLMRNDLKCIPFDFNLMWPKLTSLLLQFNSFSENISREFFENMQFLKVLDLSYTGIDFLPDSVSNLENLSALLLSNCWNLAAVPTLAKLNKLMVLDLSCSPRMKELPDGMQWLGNLRRLNLSQTGIEIFPFGLMSKYTLLEDLLIGGCGILWGSTTVKAISGGASIEEIISSNISSLELDLWNANVFDQYAKSGHWVQLDKFRITIGQPQAQFCEERSLAFSGRLVLRGNPVSLPPNTLELHLDDSADIKNLSMCLVNVTQLKYCKIRWCDDIESIIDSEEEEITLPMLERMELLVLGNLKIICRDVVRPGTLMSLKIVTVEYCPKLKTLFSGQILLQLKNLEEISVRSCTGMECIMKGEEGENDSGIEFPKLKRMKLKFMPLLESIYDGTILCPSLKSLEVASCEALKKLPLGLSATPALEEIRATRTWWNSLEWDQPDSKNVLQPYLVETRLTSTSYR 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00868 973 FunFam Probable disease resistance protein At1g63360 393 481 - -
Accr5g00868 973 FunFam Probable disease resistance protein At5g66910 306 392 - -
Accr5g00868 973 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Accr5g00868 973 FunFam Probable disease resistance protein At1g61300 143 301 - -
Accr5g00868 973 Coils Coil 37 57 - -
Accr5g00868 973 PRINTS Disease resistance protein signature 341 355 - -
Accr5g00868 973 PRINTS Disease resistance protein signature 600 616 - -
Accr5g00868 973 PRINTS Disease resistance protein signature 174 189 - -
Accr5g00868 973 PRINTS Disease resistance protein signature 248 262 - -
Accr5g00868 973 SUPERFAMILY L domain-like 470 929 - -
Accr5g00868 973 Gene3D - 306 392 IPR042197 -
Accr5g00868 973 Gene3D Ribonuclease Inhibitor 828 948 IPR032675 -
Accr5g00868 973 Gene3D Ribonuclease Inhibitor 490 717 IPR032675 -
Accr5g00868 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 408 IPR027417 -
Accr5g00868 973 Pfam NB-ARC domain 159 393 IPR002182 GO:0043531
Accr5g00868 973 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 929 - -
Accr5g00868 973 Gene3D - 139 304 IPR027417 -
Accr5g00868 973 Gene3D - 393 481 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00868 Accr-Chr5 33596254 33599175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00868 172 643 WRKY Transcription Factor Family AT5G45050 22.117 2.00e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00868 K13459 - qsa:O6P43_012576 1085.09