Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00862 ATGGCCACTGTTGGGTCTTCTTCTTCTTCTGCTTCGTCAAAGGTCTGCTATAATCCCGAGTGTAAAGAATTGAAGTCAGACAGACCTAAGAAGGGTTGGAGACTCCGTACTGGAGACTTCGCCGAGCTCTGTGATCGTTGCGGTTCTGCTTTTGAGGAAGGAAGGTTCTGTGAGATTTATCATGGAAAAGCTTCTGGTTGGAGGAATTGTGAGACATGTGGGAAGGCGATTCATTGCGGGTGTATTGTTTCATGTACAGCCTTTATGTTGTTGGATCCTGGAGGCATTGAATGCATTCCATGTGCCAGAAAGAATCTTATTTTGTCATCTAGTCTATCTTGGTCACCCTCTTTTTCTCTTCAAAGTCGTTTTAGAGAACTGACTTCAAAAAATTGGAGTCAGTTGGCTGGATCAGGTCCTGTGCCATGGAAGCAAGCACCCAGTCTATTCAATACAACTTCATCTGACCGGCACCCAGATGTGCCACCGGTAGTTGAAATATCTAGTGTTGAGAATATTTATGGAAATGAGAGGATATCTGCCTCATCTCTGGAAAAGAAAAGTGATGATCTTTCTGGAATACCAGCTAATTGGAATGTAAAGATTGGTGCGCGGGAAATGATGTTTATAAATGGAATGCGTAATGATGAAAAGGCTAGTTCATGCTTGAATATGTGCCAGCAACCTTCTCTAAAGGAGGATTCATCAACCCAACCATTTGGTTTGACTTTGCCTTATGTTCATCAAAATGAAAGAAATGGTCAAATTGGGGCAACTGGAAGTCATCTGCAACAAACTCCTCCACCTCCTCATGGAAAGCAATTTAGTGGCGCAGTACATGTTGCACCTGATTCATCAGCTGAATCACAGGTGCGAAATGGACGGCCCAAAGCAGATGCCCGAGGAAGGAACCAGTTACTGCCCAGGTACTGGCCTAGGTGCACAGACCAGGAGCTACATCAAATATCTCTGGACTCTAATTCTGTTATAACTCCATTATTCCAAAAAACGTTGAGTGCTAGTGATGCTGGGCGAATTGGACGTCTAGTGCTACCAAAAAAATGCGCTGAGGCCTACTTTCCACCAATTTCTCAGCCTGAAGGGTTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTTTGGCCCAACAATAACAGTAGAATGTATGTTTTAGAAGGTGTAACTCCGTGCATACAGTCCATGCAATTGCAAGCTGGTGACACAGTAACATTTAGTCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGATTTCGAAAAGCTTCAAGTGCTACCCAATCTGATCAGGACAATGAAACAAACAATACTGGAAATGGATGTTCTACACATGGTGAAGTTGAATTGGATCCTAGTTCATGGTCTAAAGTTGACAAATCAGGATATATAGCAAAAGAAGCACTGGGGAGCAAATCTTCCATTTCTAGGAAGAGAAAGAGTAGTGCTTTGGGTTCCAAGAGTAAGCGACTAAGAATTGAAAATGAGGATCTAATAGAGTTGAATATTACATGGGAAGAAGCTCAAGGCCTGCTCCGTCCCCCTCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAGTATGAGGATGCTCCAGTACTGGGGAAACCAACAATTTTCGCTACTGACAGTGTTGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTCAAAAATGGCGCAAATTGCCAGTTAATGCCCTTCTAACATCAAGATGGACATGTTCAGATAATCCTTGGGACCCAGAAAGATCATGTTCGGCTGCACAGGAGTTGACAGCAGAACAGCTTGAAGATTTGCTTCCCCCTTGTCATTCAGTTGTATCCAAGAAAATGAAGACTGCCAAGCAGGACCCCGATAACGTTGAAGCTTTAGAGGGACTTGACACTCTTGCTAATCTTGCTATCCTGGGAGAAGGGGAGGTTCTCCCATCGTCTGCCCAGGCCACAACAAAACACCCTCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCTAGTGGGAAGGGGCCCAAGCATAAGCAGACTTGCACATGTAATGTTTGCCTAACAGTAAAGCGCCGTTTCCGTACCTTGATGTTACGGCGTGAGAAGAAACAATCAGAGAGAGAAGCAGAGACAACACGTAAAAAGCAGCAGCCCCAGCCACCTCAGCCGCCACCACCTATGTCGGAGATATTGATTGATGATGATTCCCTGCCTTGCAGTAACACAGGAGATAGTGGTAGTCCTAATCAGAACAGGGAGGGCAATGAAGGTTCCGATGAAGACCCTAACAAGACGAAGTCATCCCCCTCGCCATTTAAGGGCCAGATTGATCTCAATATTCAGCCAGAGCGAGAGGAAGAGCTGTCTCCCAGTTCAGATTCTGGAAGCATGATTAAGTTGCTCCATAATGCTGAGATTTATCTGAGGCAGCAGAGTATGACGAACTCTTTTGCTGGAGATACTTCAGGTGGACAGTCGAAGGAAGTTGGAGATGACGCGAGGGAAGAGAAACTTTGCAATGGTGTTGCCCTTGGCAGCAGCAATCATAATGCTGACAAGGAACATACCCAAACATTGTCTATGAACGTGTGA 2637 0.4498 MATVGSSSSSASSKVCYNPECKELKSDRPKKGWRLRTGDFAELCDRCGSAFEEGRFCEIYHGKASGWRNCETCGKAIHCGCIVSCTAFMLLDPGGIECIPCARKNLILSSSLSWSPSFSLQSRFRELTSKNWSQLAGSGPVPWKQAPSLFNTTSSDRHPDVPPVVEISSVENIYGNERISASSLEKKSDDLSGIPANWNVKIGAREMMFINGMRNDEKASSCLNMCQQPSLKEDSSTQPFGLTLPYVHQNERNGQIGATGSHLQQTPPPPHGKQFSGAVHVAPDSSAESQVRNGRPKADARGRNQLLPRYWPRCTDQELHQISLDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSATQSDQDNETNNTGNGCSTHGEVELDPSSWSKVDKSGYIAKEALGSKSSISRKRKSSALGSKSKRLRIENEDLIELNITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFATDSVGEKIQWAQCEDCQKWRKLPVNALLTSRWTCSDNPWDPERSCSAAQELTAEQLEDLLPPCHSVVSKKMKTAKQDPDNVEALEGLDTLANLAILGEGEVLPSSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKQQPQPPQPPPPMSEILIDDDSLPCSNTGDSGSPNQNREGNEGSDEDPNKTKSSPSPFKGQIDLNIQPEREEELSPSSDSGSMIKLLHNAEIYLRQQSMTNSFAGDTSGGQSKEVGDDAREEKLCNGVALGSSNHNADKEHTQTLSMNV 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00862 878 MobiDBLite consensus disorder prediction 432 466 - -
Accr5g00862 878 Pfam CW-type Zinc Finger 566 607 IPR011124 GO:0008270
Accr5g00862 878 MobiDBLite consensus disorder prediction 253 271 - -
Accr5g00862 878 MobiDBLite consensus disorder prediction 713 810 - -
Accr5g00862 878 ProSiteProfiles B3 DNA-binding domain profile. 334 435 IPR003340 GO:0003677
Accr5g00862 878 MobiDBLite consensus disorder prediction 857 878 - -
Accr5g00862 878 SMART B3_2 334 435 IPR003340 GO:0003677
Accr5g00862 878 FunFam B3 domain-containing transcription repressor VAL1 312 439 - -
Accr5g00862 878 Gene3D - 556 612 - -
Accr5g00862 878 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 13 837 - -
Accr5g00862 878 MobiDBLite consensus disorder prediction 858 878 - -
Accr5g00862 878 CDD B3_DNA 332 433 IPR003340 GO:0003677
Accr5g00862 878 Gene3D - 312 439 IPR015300 -
Accr5g00862 878 MobiDBLite consensus disorder prediction 753 768 - -
Accr5g00862 878 Pfam B3 DNA binding domain 334 433 IPR003340 GO:0003677
Accr5g00862 878 ProSiteProfiles Zinc finger CW-type profile. 561 610 IPR011124 GO:0008270
Accr5g00862 878 MobiDBLite consensus disorder prediction 253 300 - -
Accr5g00862 878 MobiDBLite consensus disorder prediction 714 729 - -
Accr5g00862 878 MobiDBLite consensus disorder prediction 433 461 - -
Accr5g00862 878 SUPERFAMILY DNA-binding pseudobarrel domain 331 434 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00862 Accr-Chr5 33525492 33538353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00862 12 718 B3 DNA Binding Superfamily AT4G32010 46.069 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr5g00862 B3 9.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00862 K09287 - gmx:100782114 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00862 5 33525492 33538353 Accr5g00862 5 33525492 33538353 ECH