Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00839 ATGGGTGAAGAAGAGGGAGATAGAAAGTCTACAGCAGACCAGGATTCGCCGGAATCTTTCGCCGGAGGTTCCTGTATCCCTCAAGTTGTTAAGCTTATATTTTCCTTGATTTCTCTTTCCCATTCAGTCAGGGTCTTCGTGGCGAAATGGCAACTAATTCGGAACAAACTCGAGGAGCTCCATTCAGGGCTAATCGCCGCCGAGAACTGCGATTCCGGCGAGAACCCATCGCTCTCCGGTCTGGTCCCTGCGATTCTAACCACCGTCAACGACTGCCACGATCTCGCTCGCCGCTGCGTTGATCTTTCGTACAGCGGGAAGCTTTTGATGCAGAGCGATTTGGATGTTAGCTTCGCCAGGCTCACTTGTCACGCAAAGAAACTATCAGAGATATACTCAGCTGGTATTTTGACTCACAAGTACGCTCTCGTTGTTTCGAGGCCAAGTCTTGGAGCTTGTAAAGATGATATGAGATTTTACATGAGGGATTTGCTGACCAGAATGAAGATTGGCGATGTGGAAATGAAGAGGCAGGCTCTAATTAATCTTCACGAAGCTGTAATTGAAGACGAAAAGTATGTGAAAGTGATTGTGGAAATAGGAGAAATTGTTCATCTTCTTGTAAGTTTTCTTGATTCGCCGGAGATGGAAATCCAAGAAGAATCTGCCAAGGTTCTTTCTGTAATCGCAGGCTTTGATTCTTACAGAGGTGTTCTGATCGCATCTGGGATTATCGCGCCTCTGATCCGAGTTTTGGAATGTGGGAGTGAGTCAGGAAGAATCGGGTCTTCTAGGTGTTTGATGAAATTAACGTTTAATTCAGACAATGCTTGGTCGGTTTCAGCTCACGGAGGAGTCACATGCTTGCTCAAAATCTGCTCTAATGGAGAACCAAAAGGAGAATTGGTTGGTCCTGCTTGTGGGGTACTGAGAAATCTTGTAGGTGTTGAAGAAATAAAGAGATTCATGGTTGAAGAAGGTGCGGTTTCTACTTTTATCAGGCTGGTGAAATCCAGGGACGAAGCGATTCAGGTAAATTCCATTCAATTCATTCAAAGTATAGCCTCTGGAGATGAACAGATTAGGCAAATGGTGATTAGAGAAGGTGGAATTCGAGCCATATTACGGATTCTAGATCCTAAATGGTCATGTTCTTCAAAAACCAGGGAGATAGGAATGAGGGCTATAGAAAACTTGTGTTTTTCTTCATCTAGTTCTTTAAGTTTATTAATGAGTTATGGGTTTGTGGATCAACTGATGTATTATATTCGTAATGGGGAGGTTTCAATCCAAGAATTGGCGCTGAAAGTAGCGTTTAGATTCTGTGGAACATCAGAGGAGGCTAAGAAAGCCATGGGAAATGCAGGTTTCATGCCAGAGCTTGTTAAGTTTCTGAATGCAAAATCATTTGAAGTTAGAGAAATGGCAGCTGAGTCACTTGCTGCCATGGTTATGGTGCCCAAGAACAGAAAGAAATTTGTGCAGGATGACCAAAACATAGCTCTTCTTCTCCAACTGCTTGATCCAGAAGAGGGAAATTCAAGTCACAAGAAGTTCTTAATCTCTATCTTAATGTCATTAACAAGTTGTAACAGTGGGAGGAAGAAGATTGTGAGTTCTGGGTATGCCAAAAACATAGAGAAACTTGCAGAAGCTGAGGTTTCATCAGATGCCAAGAGACTTGTGAGGAAGCTATCCACAAACAGATTCCGCAGTATGTTGAGTGGAATCTGGCACTCATGA 1743 0.4332 MGEEEGDRKSTADQDSPESFAGGSCIPQVVKLIFSLISLSHSVRVFVAKWQLIRNKLEELHSGLIAAENCDSGENPSLSGLVPAILTTVNDCHDLARRCVDLSYSGKLLMQSDLDVSFARLTCHAKKLSEIYSAGILTHKYALVVSRPSLGACKDDMRFYMRDLLTRMKIGDVEMKRQALINLHEAVIEDEKYVKVIVEIGEIVHLLVSFLDSPEMEIQEESAKVLSVIAGFDSYRGVLIASGIIAPLIRVLECGSESGRIGSSRCLMKLTFNSDNAWSVSAHGGVTCLLKICSNGEPKGELVGPACGVLRNLVGVEEIKRFMVEEGAVSTFIRLVKSRDEAIQVNSIQFIQSIASGDEQIRQMVIREGGIRAILRILDPKWSCSSKTREIGMRAIENLCFSSSSSLSLLMSYGFVDQLMYYIRNGEVSIQELALKVAFRFCGTSEEAKKAMGNAGFMPELVKFLNAKSFEVREMAAESLAAMVMVPKNRKKFVQDDQNIALLLQLLDPEEGNSSHKKFLISILMSLTSCNSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00839 580 Gene3D - 161 569 IPR011989 -
Accr5g00839 580 MobiDBLite consensus disorder prediction 1 20 - -
Accr5g00839 580 SUPERFAMILY ARM repeat 162 561 IPR016024 -
Accr5g00839 580 SMART arm_5 190 231 IPR000225 GO:0005515
Accr5g00839 580 SMART arm_5 316 356 IPR000225 GO:0005515
Accr5g00839 580 SMART arm_5 445 485 IPR000225 GO:0005515
Accr5g00839 580 SMART arm_5 232 272 IPR000225 GO:0005515
Accr5g00839 580 SMART arm_5 273 315 IPR000225 GO:0005515
Accr5g00839 580 SMART arm_5 358 401 IPR000225 GO:0005515
Accr5g00839 580 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 328 IPR000225 GO:0005515
Accr5g00839 580 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 579 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00839 144 456 U-box Gene Family AT2G23140 26.019 1.98e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00839 - - qsa:O6P43_012559 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00839 5 33106277 33108019 Accr5g00839 5 33106277 33108019 CCT