Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00835 ATGGCAGAGGAGTTTGAAGCTGCTGGGATTTATGGTGGGAATTGGTGGATCAATAATATGAACACATGTTGTTTATCATCATCATCACTCTGTTCAATTGCTGCCAATAACGATTATGGAGGCAGCAACTTAAGTTGTACTAATTGGCAAACTCATCATGATCTCATGGATCTCAAGTCGCCTTTATTGGTTTCTCATCATGATGAGCGGAAGCAAAATCATCAGAATGAATCATCACCATCATCAGCTTCTGAAAATAATGGAAACATGTTGATCGATTCCTCCTTGGGCTTTCCCCTCCCTCCTTCATCAACTTCTTCTTTACTGGGGAGACCAGAAAGCAATTTCCAATGTGTGATTGAAGAAGAAGGTGGGGGTGTGGATTCTTGCAATAATTCAGAAATGAAAAGAAGCATGAACCAAGAATTTGGCATAGATCATGAACAGAATCTGAGTTATGGGATGTATGAAGATGATGATGAACACAATATTGTTCTTCATTTTCAGCAGCCAGAAGATCTATCGCTTTTCACCAACCCTTCCGTGGCTTATTGTAGCTATGATTCAACCAATCAGGTTACGCCACCAAGTTGGTCCAAAGCCTCTGCTGGCCACTTTTTGAAGCCTTATTCAATACCAAAGCAGCACCAGCTCGGTGAAGGATTCCACTTTTTGAAGCCTTATTCAGCTGATCATGTTTTTGCTTCTTCGTCCCCACAATCTCAAACTTTTCATCACAAAGCCAGTTGTTCACCCCTCTCATCCAAGCTCAAAAGAGAAGAAGCTCCTGTTAGTAGTGAAGAACAACCAGCTGAATTATTCAAAAGGCCCAGAATTGAAACCCCTTCACCACTACCAACTTTTAAGGTTCGGAAAGAAAAGTTAGGGGACCGAATCACAGCTCTTCAGCAATTAGTGTCACCTTTTGGAAAGACGGACACAGCATCTGTTCTTCACGAAGCCATCGAGTACATCAAGTATCTTCATGATCAAGTCAGCGTTTTAAGTGCTCCATATTTGAACAATAACTCGCCTGCTGTTCATCAAAACTGTCAGGGTTGTGATGAGAAAGAATGGAAAGATTTGAGAAGTCAAGGGTTGTGTTTGGCACCGATATCGAGTACATTCTCACTTGCTAACTACGAGATTATGGCTTCCGAGTTATGGACTCATCATGCTTATGAAGGGCCTCATCTCTTGATGTAG 1206 0.4171 MAEEFEAAGIYGGNWWINNMNTCCLSSSSLCSIAANNDYGGSNLSCTNWQTHHDLMDLKSPLLVSHHDERKQNHQNESSPSSASENNGNMLIDSSLGFPLPPSSTSSLLGRPESNFQCVIEEEGGGVDSCNNSEMKRSMNQEFGIDHEQNLSYGMYEDDDEHNIVLHFQQPEDLSLFTNPSVAYCSYDSTNQVTPPSWSKASAGHFLKPYSIPKQHQLGEGFHFLKPYSADHVFASSSPQSQTFHHKASCSPLSSKLKREEAPVSSEEQPAELFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKYLHDQVSVLSAPYLNNNSPAVHQNCQGCDEKEWKDLRSQGLCLAPISSTFSLANYEIMASELWTHHAYEGPHLLM 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00835 401 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 377 - -
Accr5g00835 401 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 289 341 IPR036638 GO:0046983
Accr5g00835 401 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 279 328 IPR011598 GO:0046983
Accr5g00835 401 CDD bHLH_AtbHLH_like 285 336 IPR045239 -
Accr5g00835 401 MobiDBLite consensus disorder prediction 245 271 - -
Accr5g00835 401 MobiDBLite consensus disorder prediction 67 96 - -
Accr5g00835 401 MobiDBLite consensus disorder prediction 76 96 - -
Accr5g00835 401 FunFam Transcription factor bHLH123 family 289 351 - -
Accr5g00835 401 Gene3D - 289 344 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00835 Accr-Chr5 33058307 33060840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00835 275 390 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 61.157 3.98e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00835 - - pcin:129306484 401.364