Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00832 ATGGGAGGTTTTCCTAACCTCCTCTGCTCCTTCTTCTTCTTCTCCACAGTACTATCAGTCTCCCAAGATACCTTAACAGCGACTCAATCTCTCGCAACCAACCAAACCCTTTTATCACCGAAGCAAATTTTCGAGCTGGGTTTCTTTCCTTCAAGCAGTTCCAAATGGTTTCTGGGAATCTGGTACAAGAATATTGAGGCTAAAACAGTGGTTTGGGTCGCAAACGGAGACAGCCCTCTTGGAAATGCCTTAGGAATTCTCAAGATCGGTGACACAGGAAACCTTGTTCTTCTAGATCAAATGGGAAATTCCATATGGTCCACAAATCAAACCACATCTTCGCCTTCAAACCCAGTTCTTCAACTCTTAGACTCAGGGAATTTAGTCCTCAGAGAAGCAAACCAGGACGACCCCACAAAGTATCTATGGCAGAGCTTCGATTACCCCACAGATACTCTGTTACCGGGCATGAAACTCGGCTGGGACTTCGACACCGGAATCGAGAGACACATAACGTCATGGAGCTCCACCGGAGAAGATCCCTCCACCGGAGATTACTCCTTCAAGATCAATTACCACGGCCTGCCCCAAGTTTTCCTGTTCAACAAACAGAGAATAGTGTACCGAAGTGGGCCCTGGAATGGCGAAAGATTCAGCGGAGTCCCCGAGATGCAACCAGGCACAGATTCTATAAAGTTCACGTTTTTTGCCGACGCACACCAAGTATACTACACCTTCTCGATCGGAAACCAGTCATTGTTCTCGAGACTCTCCGTGACCTCCAACGGCGAGCTACAGAGGATGACGTGGATCGAAAGCACAAAAATTTGGACCAAATTCTGGTACGCTCCGAAAGACCAATGCGATTACTACAAACAGTGTGGTCCATTCGGAGTTTGCGATGCGAATGCTTCGCCGGTTTGCGTGTGTATGAGAGGTTTCAGGCCGAAGAACTTGCAGGCGTGGAATCTGAGAGATGGGTCAGATGGGTGTGTGAGGAACACAAAGCTGGATTGTGGGGGAGACAAGTTCTGGGAGATGAAGAATGTGAAGCTGCCGGATACAACCTCGGTGTTCGTGAACAGGAGCATGAATATCGTGGAATGTGGTGATTTGTGCCTTAAGGATTGTAACTGTACAGCGTATGCCAACATAGAAATCAGCAATGGCGGAAGTGGGTGCGTGATGTGGAGTGACGATCTTATTGACATAAGGCAGTATCCTCGAGGTGGACAGACTCTGTATGTCCGATTGGCAGCTTCTGATGTAGGATCTGCCAATGCTTCCCATAACACAAAAGTAGCTAAGGTTGTAGGAATTACAGTTGCTGCTGCTGCAGCTGTTATACTTTTGGTATTGACTCTGTTTTTCTTGTGCAAGAAGAAACTGCGACGCCTAATCAAAGCGAAAACAGAATGCAGAGGCTCCTTAGAGAGAAGCCAAGATTTTCTAATGACTGAGGGAGTGATTTCAAGTAGCAGAGAATACTCATCAGAAAGGAATAAGATGGATGACCTGGAATTGCCATTATATGATTTTAATACTTTAAGAATGGCTACAAACAACTTTTCTGAATCAAATAAACTTGGACAAGGTGGCTTTGGTACTGTTTACAGGGGTAGGCTGGTGGAAGGACAGGAAATTGCTGTGAAGAGGTTGTCAAAAAGCTCAGTGCAAGGAGTTGAAGAGTTCAAGAATGAGGTAAAGTTAATTGTTAGGCTTCAGCACCGGAATCTTGTTCGGCTGCTTGGTTGTTGCATTGAGATGGAAGAGAAGATGTTGATTTATGAATACTTGGAGAACAGAAGCCTTGATTCCATTTTGTTTGACAAAGCGAAAAGATCTTTGTTGGATTGGCGAACGCGATTCAACATTATATGTGGAACAGCTAGAGGTCTTCTCTATCTTCACCAAGATTCTAGGTTTAAGATTATCCATAGAGATCTCAAGGCAAGCAACATTCTACTTGATAAAGAAATGAATCCAAAGATATCAGATTTTGGGATGGCTAGAATTTTCACCTCCAACCAGACACAAGCAAATACATTGAGGATAGTAGGAACATATGGCTACATGTCTCCTGAATATGCTATGGATGGAATCTTCTCGGTAAAATCAGATGTTTTCAGTTTTGGGGTGTTGGTATTAGAGATAATTAGTGGCAAAAAGAACAGAGGATTCTATAGCCCAAGCAAGGAGCTGAATCTTCTTGGACATGCTTGGATGCTGTGGAAAGAAGGAAAGGCCTTGGAACTGGTGGATTCATCCTTCGGTGACTCGTCTGTGGAATCCGAAGTTCTTAGATGCATACAGGTTGGACTCGTGTGTGTCCAAGAGCGTGCTGAAGATCGGCCAACGATGTCTTCAGTAGTGTTGATGCTGAGTAGTGAAACTGCAACAATGCCACAGCCCAAAAACCCAGGATTTGCCCTCGGAAGAAATCCCGTTGAAACTGATTCTTCTTCGAGCAAGATGGACGAATCATGCACTGTGAACCAAGTTACAGTCACAATGCTAAATGCCAGGTAG 2529 0.448 MGGFPNLLCSFFFFSTVLSVSQDTLTATQSLATNQTLLSPKQIFELGFFPSSSSKWFLGIWYKNIEAKTVVWVANGDSPLGNALGILKIGDTGNLVLLDQMGNSIWSTNQTTSSPSNPVLQLLDSGNLVLREANQDDPTKYLWQSFDYPTDTLLPGMKLGWDFDTGIERHITSWSSTGEDPSTGDYSFKINYHGLPQVFLFNKQRIVYRSGPWNGERFSGVPEMQPGTDSIKFTFFADAHQVYYTFSIGNQSLFSRLSVTSNGELQRMTWIESTKIWTKFWYAPKDQCDYYKQCGPFGVCDANASPVCVCMRGFRPKNLQAWNLRDGSDGCVRNTKLDCGGDKFWEMKNVKLPDTTSVFVNRSMNIVECGDLCLKDCNCTAYANIEISNGGSGCVMWSDDLIDIRQYPRGGQTLYVRLAASDVGSANASHNTKVAKVVGITVAAAAAVILLVLTLFFLCKKKLRRLIKAKTECRGSLERSQDFLMTEGVISSSREYSSERNKMDDLELPLYDFNTLRMATNNFSESNKLGQGGFGTVYRGRLVEGQEIAVKRLSKSSVQGVEEFKNEVKLIVRLQHRNLVRLLGCCIEMEEKMLIYEYLENRSLDSILFDKAKRSLLDWRTRFNIICGTARGLLYLHQDSRFKIIHRDLKASNILLDKEMNPKISDFGMARIFTSNQTQANTLRIVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYSPSKELNLLGHAWMLWKEGKALELVDSSFGDSSVESEVLRCIQVGLVCVQERAEDRPTMSSVVLMLSSETATMPQPKNPGFALGRNPVETDSSSSKMDESCTVNQVTVTMLNAR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00832 842 CDD PAN_AP_plant 335 419 - -
Accr5g00832 842 ProSiteProfiles PAN/Apple domain profile. 339 419 IPR003609 -
Accr5g00832 842 PIRSF SRK 3 842 IPR024171 GO:0004674
Accr5g00832 842 SUPERFAMILY Protein kinase-like (PK-like) 504 794 IPR011009 -
Accr5g00832 842 Pfam Protein tyrosine and serine/threonine kinase 526 792 IPR001245 GO:0004672|GO:0006468
Accr5g00832 842 Gene3D Transferase(Phosphotransferase) domain 1 599 806 - -
Accr5g00832 842 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Accr5g00832 842 Pfam D-mannose binding lectin 69 174 IPR001480 -
Accr5g00832 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Accr5g00832 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 802 - -
Accr5g00832 842 CDD B_lectin 28 149 IPR001480 -
Accr5g00832 842 Pfam Domain of unknown function (DUF3403) 796 842 IPR021820 GO:0004674
Accr5g00832 842 MobiDBLite consensus disorder prediction 803 827 - -
Accr5g00832 842 Gene3D - 16 146 IPR036426 -
Accr5g00832 842 ProSiteProfiles Protein kinase domain profile. 523 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00832 842 Pfam PAN-like domain 339 404 IPR003609 -
Accr5g00832 842 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Accr5g00832 842 Pfam S-locus glycoprotein domain 208 318 IPR000858 GO:0048544
Accr5g00832 842 Pfam Receptor serine/threonine kinase 478 513 IPR022126 GO:0004674
Accr5g00832 842 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 785 - -
Accr5g00832 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 215 IPR036426 -
Accr5g00832 842 SMART serkin_6 523 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00832 842 SMART ntp_6 339 418 IPR003609 -
Accr5g00832 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 146 - -
Accr5g00832 842 SMART blect_4 28 149 IPR001480 -
Accr5g00832 842 CDD STKc_IRAK 529 794 - -
Accr5g00832 842 Gene3D Phosphorylase Kinase; domain 1 485 598 - -
Accr5g00832 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 488 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00832 Accr-Chr5 32997529 33004482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00832 422 809 Receptor kinase-like Gene Family AT4G23190 52.685 1.04e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr5g00832 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00832 - - gmx:106799702 1244.18