Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00830 ATGGGATTCAAACATAGTACTCTTAGTTTGATTAATGCTCTCCTCGTAATTTCCAGCTTCTGCGTGGCTTTAATCTCAGCCAACGATACGATTACGCCAGGCCAAATCATCAGAGATTCTGAGACACTGAGCTCTAACAGTAACGACTTCATACTAGGATTCTTCAGCCCTCCAAATTCAACACATCGCTATGTGGGAATCTGGTATTTCTCTCATGACAACCTCGTCTGGGTGGCTAACAGGGACAAACCCATCAACGATTCTTCTGGGGTCCTCACAATTTCCCAGGACGGCAACCTTGTGATATTAGATGGACAAAAGCATGTCCTCTGGTCATCAAACGTGTCCTACAATGGAAAAAACACGACAGCCCACATTCAAGATTCTGGGAATCTTGTCCTCCAAGTGTTTGATGAAAATACTGGGAAGAAATTAATATGGCAGAGCTTTGAACATCCTGCTGATGCAGCAATTCCAAACATGACGATCAGTGCCAACAGATTCACAGGTAAGAAGATAGAGTTTGTGTCATGGAAAAGCTTTTCTGATCCTTCACCTGGGTTCTTCTCTGCGAGTCTAGAACGTCTTGTTCATGCAGAATTGTTCTTGTGGGTCAATAGAACTCGCCCATATTGGCGAACTGGTCCATGGAATGGAAGGATCTTCATTGGAGCACCATTGATGTCAACTTATTTACATGGATTGTCTAGGAGAAATCAAGATGATGGAACTGTTTATCTAACTTACAGTTTTCTTGACTCTGGGATTCTTTCATTGACCCCACAAGGCAAGCTTAGATTGGTAAGGTTTTACAACAAGAAGAAATATCTGGATGTGGATTTGTATCCATCAGACTCCTGTGATCACTATGGCATGTGTGGGGAGTTTGGGAGCTGTAATGGTAACAGAACACGAAGGTGTCGCTGCTTAAGTGGGTTTGAACCAAAGGTTAGAGAGGAATGGAATAGACAGAATTGGACAAGTGGGTGTGTGAGAAAGTCGCCTTTGATGTGTGAGAACCTGAAGAATAGGAGTAAAAAAGCTCGGGCAGAAGATGTGTTTCTGAGACTTCAGAATATGAAAGTGCCAGATTTTGCAGAGACGTCAGGTGTTGACACAGAAGATCAATGCAGAACTGAGTGCTTCAATAATTGCTCATGTTTGGCATATGGATTTGATGATGCTGGCATTGGATGCATGTATTGGACTAAACCCTTGATTGACCTACAGGAATTCTCTTATGGAGGAACTGATCTCTATATTCGTGTGCCTCATTCAGAACTTGGAAAAGGTTCTGATAAAAGCACAATTAAGAGAAAAATCATCACAATGACAGTATCGGTTGGAATAGTTATCTTAGTTGCATTTGTTTTCCTATCAGTAATCTATACCTATCGCTCTCGGAGCAAAATAGCCCATAAGCAAAGAGAAATTCAGAGTCAAAGAGTGAACGACACAAACAATCAACTTAAGTTAGATGAGTTTTCGATATTTGATTTTGAAGAGGTTGCATCTGCTACAAATAACTTTCACTTAGCTAACATTCTAGGGAAGGGTGGTTTTGGCCCAGTTTACAAGGGGATATTGCAAGATGGTCAGGAAATTGCAGTAAAAAGGCTATCTAGAGCATCCGGACAAGGGCAAGAAGAATTCATGAATGAGGTGTTAGTCATCTCAAAGCTTCAACATCGCAATCTTGTAAAACTTCTTGGTTGCTGCCTTGAAGGAGATGAGAAGATGTTAATATATGAATTCATGTCAAATAAAAGCTTGGATGCATTTCTCTTTGATGCAATCCAAAGAAAATGTTTGGATTGGAGAAAAAGATTTAACATTATTGAAGGAATAGCTCGAGGTTTACTTTATCTTCATAGAGATTCTAGGCTAAAAATCATACACAGAGATTTGAAAGCAAGTAATATCTTGTTGGATGGAGAGATGAATCCAAAAATATCAGATTTTGGTCTAGCTAGAATTTTCGGAGCAAGTGATGAAGATATGGTTAATACTAAAAGAGTCATTGGAACATATGGTTACATGTCTCCCGAATATGCAATGGAGGGTTTGTTTTCCGAAAAATCTGATGTCTATAGTTTTGGAGTTTTATTATTGGAGATTGTTAACGGAAACAGAAATAATAGCTACCACACCAGCTATCACACCGATCAAGAGTCTTTTAGCCTTATAGGACTTGCATGGAGGCTATGGAATGAAGAGAAAATTATATCTTTAGTAGATCCAGAAATATGGGATTCATGCAATGGGAGCCAAATAATGAAGTGCATACACATAGGGCTTCTATGTGTGCAAGAAGCAGCGAAAGAAAGGCCAAGCATGACCAATGTGGTTATGATGCTAAGTGAGAATATTCATCTTCCTCCTCCAAAGCAAGTAGCTTCTGTGCATAAGCATTGGGTTTCATGTTCAGAGTCCTCGAATGCTATGGAACGTCAAATTGATTGCCACAATTATGTAACTGTTACTGATATTCAAAGTAGATAA 2502 0.3973 MGFKHSTLSLINALLVISSFCVALISANDTITPGQIIRDSETLSSNSNDFILGFFSPPNSTHRYVGIWYFSHDNLVWVANRDKPINDSSGVLTISQDGNLVILDGQKHVLWSSNVSYNGKNTTAHIQDSGNLVLQVFDENTGKKLIWQSFEHPADAAIPNMTISANRFTGKKIEFVSWKSFSDPSPGFFSASLERLVHAELFLWVNRTRPYWRTGPWNGRIFIGAPLMSTYLHGLSRRNQDDGTVYLTYSFLDSGILSLTPQGKLRLVRFYNKKKYLDVDLYPSDSCDHYGMCGEFGSCNGNRTRRCRCLSGFEPKVREEWNRQNWTSGCVRKSPLMCENLKNRSKKARAEDVFLRLQNMKVPDFAETSGVDTEDQCRTECFNNCSCLAYGFDDAGIGCMYWTKPLIDLQEFSYGGTDLYIRVPHSELGKGSDKSTIKRKIITMTVSVGIVILVAFVFLSVIYTYRSRSKIAHKQREIQSQRVNDTNNQLKLDEFSIFDFEEVASATNNFHLANILGKGGFGPVYKGILQDGQEIAVKRLSRASGQGQEEFMNEVLVISKLQHRNLVKLLGCCLEGDEKMLIYEFMSNKSLDAFLFDAIQRKCLDWRKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDGEMNPKISDFGLARIFGASDEDMVNTKRVIGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIVNGNRNNSYHTSYHTDQESFSLIGLAWRLWNEEKIISLVDPEIWDSCNGSQIMKCIHIGLLCVQEAAKERPSMTNVVMMLSENIHLPPPKQVASVHKHWVSCSESSNAMERQIDCHNYVTVTDIQSR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00830 833 CDD STKc_IRAK 516 788 - -
Accr5g00830 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Accr5g00830 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 184 IPR036426 -
Accr5g00830 833 SUPERFAMILY Protein kinase-like (PK-like) 495 816 IPR011009 -
Accr5g00830 833 Gene3D - 23 150 IPR036426 -
Accr5g00830 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 585 - -
Accr5g00830 833 ProSiteProfiles Protein kinase domain profile. 510 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00830 833 Pfam PAN-like domain 349 409 IPR003609 -
Accr5g00830 833 SMART ntp_6 349 423 IPR003609 -
Accr5g00830 833 ProSiteProfiles PAN/Apple domain profile. 338 424 IPR003609 -
Accr5g00830 833 Pfam D-mannose binding lectin 75 179 IPR001480 -
Accr5g00830 833 Gene3D Transferase(Phosphotransferase) domain 1 586 797 - -
Accr5g00830 833 CDD PAN_AP_plant 346 424 - -
Accr5g00830 833 Pfam Protein tyrosine and serine/threonine kinase 511 785 IPR001245 GO:0004672|GO:0006468
Accr5g00830 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
Accr5g00830 833 SMART serkin_6 510 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00830 833 CDD B_lectin 35 153 IPR001480 -
Accr5g00830 833 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Accr5g00830 833 PIRSF SRK 2 833 IPR024171 GO:0004674
Accr5g00830 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 794 - -
Accr5g00830 833 Pfam S-locus glycoprotein domain 212 316 IPR000858 GO:0048544
Accr5g00830 833 SMART blect_4 34 153 IPR001480 -
Accr5g00830 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 778 - -
Accr5g00830 833 Gene3D Phosphorylase Kinase; domain 1 483 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00830 Accr-Chr5 32953171 32956381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00830 468 793 Receptor kinase-like Gene Family AT4G11530 55.319 9.96e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr5g00830 PK_Tyr_Ser-Thr 5.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00830 - - gmx:112998788 1011.91