Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00829 ATGGGATTCAAACATAGTACTGTTAGTTTGATTAATGCTCTCCTCGTAATTTCCAGCTTCTGCGTGGCTTTAATCTCAGCCAACGATACGATTACGCCAGGCCAAATCATCAGAGATTCTGAGACACTGAACTCTAACAGTAACGACTTCATACTAGGATTCTTCAGCCCTCCAAATTCAACTCATCGCTATGTGGGAATCTGGTATCTCTCTAATGACAACCTCGTCTGGGTGGCTAACAGGGACAAACCCATCAACGATTCTTCTGGGGTCCTCACAATTTCCCAGGACGGCAACCTTGTGATATTAGATGGACAAAAGCATGTCCTCTGGTCATCAAACGTGTCGTACAACGGAACAAACACGACAGCCCAGATTCAAGATTCTGGGAATCTTGTCCTCCAAGTGTTTGATGAAAATACTGGGAAGAAATTAATATGGCAGAGCTTTGAACACCCTGCTGATGCAGCAGTTCCAAACATGAGGATCAGTGCCAACAGATTCACTGGTAAGAAGATAGGGTTTGTTTCATGGAAAAGCTTTTCTGATCCATCACCTGGCTTCTTCTCTGCGAGTCTAGAACGTCTTGTTCTTCCAGAAGTGTTCTTGTGGGTCAATAGAACTCGCCCATATTGGCGAACTGGTCCATGGAATGGAAGGATCTTCATTGGAGCACCATTGATGTCAACTGGGTATTTATATGGATGGTCTATGGGAAATCAAGATGATGGAACTGTTTATGTAACTTACAGTTTTCTTGACAAAGCTGCTTCTGGGATTCTTTCATTGAACCCACAAGGCAAGCTTAGATTGGTTAGGTTTTACAATAAGAAGAAATATCTGGATGTAGTTTTGGATCTAACAGAGTGTGATCACTATGGCATGTGTGGGGATTTTGGGAGCTGTAATGATCAGAGTACACCAATGTGTAGCTGCTTAAGTGGGTTTGAACCAAAGGTTACAGAGGAATGGAATAGACAGAATTGGACAAGTGGGTGTGTGAGAAAGTCGCCACTGATGTGTGAGAGCTTGAAGAATAGGAGTAAAAAAGCTGGGGCAGAAGAAGAAGATGGGTTTCTGAGATTTCAGAATATGAAAGTGCCAGATTTTGCAGAGAGGTCAGTTGTTGACACAGAAGATCAATGCAGAACTGAGTGCTTCAATAATTGCTCATGTTTGGCATATGCATTTGAAGCTGGCGTTGGATGCATGTATTGGACTAAACCCTTGATTGACGTACAGAAATTCTCTAATGGAGGAACTGATCTCTATATTCGTGTGCCTCATTCAGAACTTGGAAAAGGTTCTGATAAAAGCACAAATAAGAGAATGATCATCGTAGTGACAGTATCAGTTGGAACAGTTATCATAGTTGCATTTGTTTGCCTGTCAGTCATCTATACTTATCACTCTCGGAGCAAAATAGCCCATAAGCAAAGAGAAAATCAGAGTCAAAGAGTGAACGACACCAACAAACAAGTTAAGTTAGATGAGCTTCCGATATTTGATTTTGAAGAGGTTGTATCTGCTACAAATAACTTTCACTTAGCTAACATTCTAGGGAAGGGTGGTTTTGGCCCAGTTTACAAGGGGACATTGCAAGATGGTCAGGAAATTGCAGTAAAAAGGCTATCTAGAGCATCCGGACAAGGGCAAGAAGAATTCATGAATGAGGTGTTAGTCATCTCGAAGCTTCAACATCGCAATCTTGTAAAACTTCTTGGTTGTTGCCTTGAAGGAGATGAAAAGATGTTAATATATGAATTTATGCCAAATAAAAGCTTGGATGCATTTCTCTTTGATGCAATCCAAAGAAAATATTTGGATTGGAGAAAAAGATTCAACATTATTGAAGGAATAGCTCGAGGTTTGCTTTATCTTCATAGAGACTCTAGGCTAAAAATCATACACAGAGATTTGAAACCAAGTAACATCTTGTTAGATAAGGATATGAATCCAAAAATATCAGATTTTGGTCTAGCTAGAATTTTCGGAGCAAGTGAAGATATGGCTAATACTAAAAGAGTCGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGGAGGGTCAGTTTTCCGAAAAATCTGATGTCTATAGTTTTGGAGTTTTGTTATTGGAGATTGTTAACGGAAGAAGAAACAGTAGCTACCACGCCGATCAAGAGTCTCTTAGCCTTATAGGACTTGCATGGAGGCTATGGAATGAAGAGAAAATTATATCTTTAGTAGATCCAGACATATGGGATTCATGCAATGGGAGCCAAATAATGAAGTGCATACACATAGGGCTTCTATGTGTTCAAGAAGCAGCGAAAGAAAGGCCAAGCATGACCAATGTGGTTATGATGCTTATAAGTGAGAACGTTCATCTTCCTCCTCCAAAGCAAGTAGCTTTTGTGCATAAGCATTGGGTTTCAAGTTCAGAGTCCTCTAATTATAAGGAACGTCAAATTGATTCCCACAATAATGTAACTCTTACTGATATCCAAGGTAGATAA 2502 0.4005 MGFKHSTVSLINALLVISSFCVALISANDTITPGQIIRDSETLNSNSNDFILGFFSPPNSTHRYVGIWYLSNDNLVWVANRDKPINDSSGVLTISQDGNLVILDGQKHVLWSSNVSYNGTNTTAQIQDSGNLVLQVFDENTGKKLIWQSFEHPADAAVPNMRISANRFTGKKIGFVSWKSFSDPSPGFFSASLERLVLPEVFLWVNRTRPYWRTGPWNGRIFIGAPLMSTGYLYGWSMGNQDDGTVYVTYSFLDKAASGILSLNPQGKLRLVRFYNKKKYLDVVLDLTECDHYGMCGDFGSCNDQSTPMCSCLSGFEPKVTEEWNRQNWTSGCVRKSPLMCESLKNRSKKAGAEEEDGFLRFQNMKVPDFAERSVVDTEDQCRTECFNNCSCLAYAFEAGVGCMYWTKPLIDVQKFSNGGTDLYIRVPHSELGKGSDKSTNKRMIIVVTVSVGTVIIVAFVCLSVIYTYHSRSKIAHKQRENQSQRVNDTNKQVKLDELPIFDFEEVVSATNNFHLANILGKGGFGPVYKGTLQDGQEIAVKRLSRASGQGQEEFMNEVLVISKLQHRNLVKLLGCCLEGDEKMLIYEFMPNKSLDAFLFDAIQRKYLDWRKRFNIIEGIARGLLYLHRDSRLKIIHRDLKPSNILLDKDMNPKISDFGLARIFGASEDMANTKRVVGTYGYMSPEYAMEGQFSEKSDVYSFGVLLLEIVNGRRNSSYHADQESLSLIGLAWRLWNEEKIISLVDPDIWDSCNGSQIMKCIHIGLLCVQEAAKERPSMTNVVMMLISENVHLPPPKQVAFVHKHWVSSSESSNYKERQIDSHNNVTLTDIQGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00829 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 793 - -
Accr5g00829 833 SMART serkin_6 514 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00829 833 SMART blect_4 34 153 IPR001480 -
Accr5g00829 833 CDD PAN_AP_plant 352 428 - -
Accr5g00829 833 SMART ntp_6 354 427 IPR003609 -
Accr5g00829 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 477 589 - -
Accr5g00829 833 Pfam Protein tyrosine and serine/threonine kinase 515 784 IPR001245 GO:0004672|GO:0006468
Accr5g00829 833 Gene3D - 23 150 IPR036426 -
Accr5g00829 833 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544
Accr5g00829 833 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Accr5g00829 833 CDD STKc_IRAK 520 785 - -
Accr5g00829 833 Pfam PAN-like domain 354 413 IPR003609 -
Accr5g00829 833 Gene3D Transferase(Phosphotransferase) domain 1 590 792 - -
Accr5g00829 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 184 IPR036426 -
Accr5g00829 833 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Accr5g00829 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 777 - -
Accr5g00829 833 Gene3D Phosphorylase Kinase; domain 1 470 589 - -
Accr5g00829 833 Pfam D-mannose binding lectin 75 179 IPR001480 -
Accr5g00829 833 CDD B_lectin 35 153 IPR001480 -
Accr5g00829 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Accr5g00829 833 SUPERFAMILY Protein kinase-like (PK-like) 498 810 IPR011009 -
Accr5g00829 833 ProSiteProfiles PAN/Apple domain profile. 341 428 IPR003609 -
Accr5g00829 833 ProSiteProfiles Protein kinase domain profile. 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00829 833 PIRSF SRK 2 833 IPR024171 GO:0004674
Accr5g00829 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00829 Accr-Chr5 32876434 32879655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00829 502 800 Receptor kinase-like Gene Family AT4G23140 59.016 5.27e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr5g00829 PK_Tyr_Ser-Thr 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00829 - - gmx:112998788 1083.17