Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00824 ATGACGACGCTCCACCCCGCCGTGGAGTACGACGCTGACTCCGTCGCTTCCTCCCCTCGCTCCGACCATTTTCATGACCACTCACCTCGTGTCCGCTTCATGTGCAGCTTCGGCGGTAGAATATTACCCCGCCCCCGCGACAACCAGCTCCGATACGTCGGTGGCGACACCCGAATAGTCGCCCTCCATCGCTCAATCTCCTTCGCCGCCCTCCTCCTCAGGCTTTCTAAGATCTCAGGCACTACCAATATAACAGTGAAGTATCAGCTTCCCAATGAGGATCTGGATGCTTTGATTTCCGTTACGACGGACGAGGATGTGGAGAACATGATGGAGGAGTACGAGCGGGTCGCACAGAATCAAAACCCGAGGTCGGCTCGGCTCCGGCTATTTTTGTTCGATAAGGAAGAAGATTCTAGAACCAACAGTATCAGCTCCCTACTGGACGGCTCAGCCAAACGCGAGAGCTGGTTTGTCGATGCCCTAAACAGCGGCGTAGCTCGGCTCGAGCGAGGCCCTTCAGAGGCGTCTTCCATGCTTTCTGAAGTGCCTGATTATCTCTTCGGGTTGGAAAACTCCGACGACGTTCAAACCCGGGAACATAGGTTGAATTTCCGACCCGTTGTCAACGACAACGTCTCCTGTTCTGATCCTAGCTCGCCGGCTGCGGTTGTTTCGTCTCCGTTTTGCTCCACCTCATCGGTGGCAAATGTGCCGTCCATACCGAACCTCCCGCCGGTTAAAACCAAACCGGATAATCCGGTTCCTGTCACGGAATCGAACGAAAATCAATTTGATGGTTTTCAAACCGGAAATCCAGGTGGCCAGATACCTCAGTACCCGCCGGGTTCTACTTATCCCGGTCACTCTGTACAACCTGTTCCTGTTTACTACATTCCAGGTCCTGTTCCGGTTCAACATGGGCAGGTACCGGTCCAACCGGTTACATTTCAGGGGCCTTATGTTCAGCCATACCCGGCGGTGGTGCCAGCTCAGGTGCCAATGGGTTATCAACATGTAGTTCCCGGTTCGACCGCCCAAGCATACAGTGGAGGGATGAGACCCGTTGGTGGTGTGCATCCATACGAAGCGGCAGCAAGGGTTTTTCCAGACGGCTTGAGGCAGCAGCACGCGTATCAAGCAGTTCCGAATTCCGGCAGTACCCCTGTTTATCCGGTGATGACGATGGCAAGTGGGGACGAATCGCAGAGAACTGGAGCGGATTATGGGACGGGTCGGGGCCCCAACATGGAATGA 1257 0.5497 MTTLHPAVEYDADSVASSPRSDHFHDHSPRVRFMCSFGGRILPRPRDNQLRYVGGDTRIVALHRSISFAALLLRLSKISGTTNITVKYQLPNEDLDALISVTTDEDVENMMEEYERVAQNQNPRSARLRLFLFDKEEDSRTNSISSLLDGSAKRESWFVDALNSGVARLERGPSEASSMLSEVPDYLFGLENSDDVQTREHRLNFRPVVNDNVSCSDPSSPAAVVSSPFCSTSSVANVPSIPNLPPVKTKPDNPVPVTESNENQFDGFQTGNPGGQIPQYPPGSTYPGHSVQPVPVYYIPGPVPVQHGQVPVQPVTFQGPYVQPYPAVVPAQVPMGYQHVVPGSTAQAYSGGMRPVGGVHPYEAAARVFPDGLRQQHAYQAVPNSGSTPVYPVMTMASGDESQRTGADYGTGRGPNME 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00824 418 CDD PB1_UP2 34 133 - -
Accr5g00824 418 MobiDBLite consensus disorder prediction 396 418 - -
Accr5g00824 418 Gene3D - 51 136 - -
Accr5g00824 418 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 135 - -
Accr5g00824 418 SMART PB1_new 45 135 IPR000270 GO:0005515
Accr5g00824 418 PANTHER OS05G0427100 PROTEIN-RELATED 12 345 - -
Accr5g00824 418 SUPERFAMILY CAD & PB1 domains 47 142 - -
Accr5g00824 418 Pfam PB1 domain 46 135 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00824 Accr-Chr5 32836013 32837361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00824 20 225 MAP Kinase Kinase Kinase AT3G46920 39.815 5.41e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00824 - - gmx:100806717 461.07