Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00821 ATGGGTGAGGAGGAGGAGGAAGTTTTGCCGGATCATCTGCGGTGCAAGCGCACCGACGGCCGCAAATGGCGGTGTAGCCGGAGAGTGATGGACAACGTGAAGCTCTGTGAGATTCACTATCTTCAAGGTCGACATCGGCAATACAAAGAAAAGGTCCCGGAGTCGCTGAAGCTTCAGAGAAAGCGTAAGAAAGGGCTTAATAAGGATGACTCTGTTCTCAACAATGTCGAAGTGAAGGCACGGAAAGTGGTCAAGATGGCGAAGATGATGAGAAAAAGGATAAAAGTGTCAGATGATTCGGAGTCAATGGAAGCTCCTGTGGGGAAGAAGGTGTCCAAGCAGGGTAATAAGCAGTTGGAGTTGATAAGGATGGTGCTAAAGAGAGAGGTTGAGAAAAGGAAGAAGAAGAAGAAGATGAAGAGGAAGGAGGAGGAGGAGGAACAAGAGGAATTGCATTACAGCGATGGAGAGTTAACAAAAGAATTACCCAATGGGTTAATGGCAATTTCTATGGCATCAACGGCCCCAGAATACTGCAATGTAGGTTCTCAATATGATGTTAAATTATGCGTTGATCATAAGGCAATTACTCCTCGTTACTTCAGGTCCAAGAATGTTGAGAGGCTGCCTGAGGGAAAGTTGCAGGTTTTGCCGTATGAACGCAAGTGTAAGAGGAAGAAGTGTCATTGGTGTCAAAGAAGTGATTCTTGGAATCTAATAAAGTGTTCAACCTGTCAGAAAGAGTTTTTCTGCATGGATTGCATTAAAGAACGGTATTTTGATACTCAAAATGAAGTTAAGATGGCATGTCCTGTCTGTCGAGGAACTTGCTCATGTAAAGACTGCTTGAGGAGTAAATGTAAAGACAACGAAACTAAGGAGTTTTTGGCTGGTAAAAGCAAAGTTGATAGAATACTGCATTTTCATTATTTGGTTTGCACGCTACTTCCTATACTGAAACAAATAAATGAAGACCTCAATGCTGAGATAGAAACAGAAGCTAAATTCAGAGGTAAAAGACCATGTGATACTCACATCAAGCAAGTTGAATGTTGCGGCAATGACCAAGTTTACTGCAACCAATGCAAAACACCCCTATTGGATCTCCATAGAAGCTGTCCAATTTGTTCCTATAGCCTTTGCATGAGTTGTTACAGGCAATCGTGCCATAGGAACTCCTCTGAAGAAATCATTACATCTATTTCTGAGTCATCTGATGGGATGGATGCCTGCCTTGCTGGTGAAAATCATCTTTTGGATAAGAAGGCCATCACCAACGGCAATTCAGTAGCGACTTTTTCATTGCATAAAAGCACAAAATATGATGGTATTGGTGATGTATCTTGTCCACCAAAAGAACTTGGTGGTTGTGGTGATAAATTTCTTGAATTGAGATGTGTTTTTCCTTTAAGTCAGATCAAGCAGATGGAAGTAACTGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGACAAAAGTTCAAGCTGCTCATTGTGTCCAGACACAGATAATAAACTTGATGGATTTAAGCAGTTACAAGAAGCAGCTCTTAGAGAAGATTCGAAAGATAATTGGTTGTTTTATCCCACTGTTTTGGACATTGGTGCTGATAACTTTGAACACTTTCAGAAGCACTGGGGAAAAGGCCATCCTGTAGTAGTGCGAGATGTGCTCCGAAATACATCAAACCTCAGCTGGGATCCATTGGTCATGTTTTGTACTTATCTTGAAGGTAGCATCTCAAGATATGAGAATGACAAGGATGAACTCGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTACTTTACTGGATCTCTTAAATGTCAGCCACAGAAAAACATGTGGCATGATATGCTGAAATTGAAGTGGTTATTGTCTTCCCAACTATTCAAAGAATGGTTTCCAGCTCATTTTGCTGACGTAATTGTTGCTCTACCGCTTCAAGAATACATGAATCCTACATCTGGTTTTTTGAATTTAGCTATAAATCTGGCTCAGGAGAGTGCAATGCATGACCTAGGACCATATATCTATCTTTCATATAGCTGTGGTGATGAACAGAGTGACTTCGTGACAAAACTATCTTATGATTCATATGATGTGGTCAATATTATGGCTCACTCCACGGATGTCCCTCTCTCTACAGAACAACTGACTAAAATAAGGAAGCTGCTGAAAAGGCACCGAAGTCTTTGTCGAAGGGATTCTTCTGAAATTAGTGCGGACCAATTAAAGGAACAGGGAGAGAAAGTAAATTCATTACCGCCTGCTGAAGACATTGAAATGACGAGGTTGCATAGAAAGGAGAGAGAAGAAAAGCATTTTTCCAGGAGAGTCAACAGAACAGCTTGCATCATTACTGAAGCAACAGATATAGTTTCTCAAAATACAGGCAGCAAAATTTCCCAGGATGAAGAATGTGATTCTGAATCAGATTCTGATTCTGAAAATCCATATGGAAGTTCAAATAATCATAGAGATGGAAAGTTTATCAAACATTCTGGTGCCCAGTGGGATGTCTTTCGTAGACAAGATGTTCCAAAGCTCTTAGAATACCTCAAAAGACACTCTGCTGAATTTTCTCCTTCCCATGACGATCACAAGCAGGTGGATCATCCACTTTTAGATCAGAGCTTCTTTCTTGACAACACTCACAAGATGAGGCTCAAGGAGGAATATAAAATTGAACCATGGACTTTTGAGCAACATGTCGGTGAAGCTGTCATTATTCCTGCTGGATGCCCTTACCAGATTAGAAATTCTAAGTGTTGTGTTCATGTTGTATTGGAATTTGTTTCCCCTGAGAATGTCGCCGAGTGTATCCATTTGATTGATGAAGCCCGTCAGCTTCCAGAAGACCACAAAGCAAATGTTGACCATCTTGAGGTGAGGAAAATGGCCCTTTATAGCATCGATTCTGCAATTAAAGAGATACGTGAACTTACCTCCAAAACGTGA 2982 0.4098 MGEEEEEVLPDHLRCKRTDGRKWRCSRRVMDNVKLCEIHYLQGRHRQYKEKVPESLKLQRKRKKGLNKDDSVLNNVEVKARKVVKMAKMMRKRIKVSDDSESMEAPVGKKVSKQGNKQLELIRMVLKREVEKRKKKKKMKRKEEEEEQEELHYSDGELTKELPNGLMAISMASTAPEYCNVGSQYDVKLCVDHKAITPRYFRSKNVERLPEGKLQVLPYERKCKRKKCHWCQRSDSWNLIKCSTCQKEFFCMDCIKERYFDTQNEVKMACPVCRGTCSCKDCLRSKCKDNETKEFLAGKSKVDRILHFHYLVCTLLPILKQINEDLNAEIETEAKFRGKRPCDTHIKQVECCGNDQVYCNQCKTPLLDLHRSCPICSYSLCMSCYRQSCHRNSSEEIITSISESSDGMDACLAGENHLLDKKAITNGNSVATFSLHKSTKYDGIGDVSCPPKELGGCGDKFLELRCVFPLSQIKQMEVTAEEIVCSYDFPETLDKSSSCSLCPDTDNKLDGFKQLQEAALREDSKDNWLFYPTVLDIGADNFEHFQKHWGKGHPVVVRDVLRNTSNLSWDPLVMFCTYLEGSISRYENDKDELEACLDWCEVEINIRQYFTGSLKCQPQKNMWHDMLKLKWLLSSQLFKEWFPAHFADVIVALPLQEYMNPTSGFLNLAINLAQESAMHDLGPYIYLSYSCGDEQSDFVTKLSYDSYDVVNIMAHSTDVPLSTEQLTKIRKLLKRHRSLCRRDSSEISADQLKEQGEKVNSLPPAEDIEMTRLHRKEREEKHFSRRVNRTACIITEATDIVSQNTGSKISQDEECDSESDSDSENPYGSSNNHRDGKFIKHSGAQWDVFRRQDVPKLLEYLKRHSAEFSPSHDDHKQVDHPLLDQSFFLDNTHKMRLKEEYKIEPWTFEQHVGEAVIIPAGCPYQIRNSKCCVHVVLEFVSPENVAECIHLIDEARQLPEDHKANVDHLEVRKMALYSIDSAIKEIRELTSKT 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00821 993 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 11 992 IPR045109 GO:0032454|GO:0033169
Accr5g00821 993 MobiDBLite consensus disorder prediction 744 782 - -
Accr5g00821 993 ProSiteProfiles WRC domain profile. 9 55 IPR014977 -
Accr5g00821 993 SMART cupin_9 642 956 IPR003347 -
Accr5g00821 993 MobiDBLite consensus disorder prediction 803 838 - -
Accr5g00821 993 Pfam WRC 10 51 IPR014977 -
Accr5g00821 993 Coils Coil 126 152 - -
Accr5g00821 993 ProSiteProfiles JmjC domain profile. 661 956 IPR003347 -
Accr5g00821 993 MobiDBLite consensus disorder prediction 94 113 - -
Accr5g00821 993 ProSiteProfiles Zinc finger RING-type profile. 228 274 IPR001841 -
Accr5g00821 993 MobiDBLite consensus disorder prediction 140 154 - -
Accr5g00821 993 MobiDBLite consensus disorder prediction 131 154 - -
Accr5g00821 993 SUPERFAMILY Clavaminate synthase-like 541 977 - -
Accr5g00821 993 Gene3D Cupin 534 965 - -
Accr5g00821 993 MobiDBLite consensus disorder prediction 768 782 - -
Accr5g00821 993 Pfam JmjC domain, hydroxylase 842 937 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00821 Accr-Chr5 32805544 32813082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00821 1 49 GRF Transcription Factor Family AT2G22840 46.939 8.14e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr5g00821 JmjC 9.3e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00821 K15601 - gmx:100787798 1207.59