Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00798 ATGATTCCTGTTTCAGCCTCTTTATTATTATTGGCCTGTCTCTTTATAACAGGCCATGGTTCTGATGAGAGTGAAACCGAAATCCATTGCCTGAAATCCATCAAACAATCAATTGATCCATTCAATTATTTATCTGATTGGAATTTCGACATAAATCTTAAAGGCTACAACTTTTGTAGATTCTCTGGTGTTCAATGCTTGGAAATCGATGAACTGAGAGAAGTATCAAGTCTCAATCTTTCTAATATGGGCCTCAAGGGACCATTCCCTCGAGGTATTGAAAATTGTTCATCACTTCAGATTCTTGACCTTTCCTTAAACGACATTTCAGGTGAAATTCCTGAGGAAGTTGCAAACTTGTATTATCTGGTCAGCCTTAAACTTGATGGCAACCAGCTATATGGTGAAATCCCTCATAAAATTGGGTTGCTTCCTCGGATAGAATCTTTTAATGTTGCCAACAATTTTTTGTCAGGGGAAGTGCCTGTCTTTACCGGAAGTCCTCATGTTGAATTGAGTTATGCCAATAATAGCGGCCTTTGTGGAGACACCCTAGAACCCTGTGCAGACAGATCTTCTGATAGATCATTTTGGTACAGTTTTGCTATTGCTTATGTTTGTTCAGTAAGCTCAGTCATAGTTTCTTTCATGTACTATTTCCAACCTTGGAGAGCCTTGAAGAGAAGGAAGAGAAATGCTATATCTTCTTTTAGGAGAAAGAGACAGAACATTCAATCTCATCCTACCCAACTTGTTGAATTGCTGCCATTAGCACTGCAAGAGCAAGGAATCAAAGAGCTCTCAGCATTATTAGAGACGTTGATTCCACGAATAAACTTTGGGGAACTATGTGAGGCAACTAACTACTTCAGCACAGACAATGTCTTAGGATTTGGAACGACAGGGATTGTGTACAAGGCCAAGCTACCAAACAACAACTACTACTTCATGGCAGTTAAAAGACTCTATGATTCTCAACTGTACAAGACAGAGTTCTTGCTAGAAACTACAATCCCAGGGAGACACAGACACCACAACATAGTCCCTCTTGTTGGATTCTATCTGGACAAAAAGGAACGGGTTCTGGTTTATGAGTACATGTCCAATGGAAAACTCCAAGGTTGGCTACTTCAATCTGATAATAATGGACCTCATCATCAAGCTATGGTATTGGAATGGCCTGTGAGGGTTTATATTGCTCTTGGCCTAGCCAGAGGCTTGTCTTGGCTTCACAATAACTGCAACATTGTGCATCTCAATCTGAGTTCAGAGTGTGTTCTTCTCAGCAAAGATTTTGAACCCAAAATTTCAAACTTTGGGAAGGCCAAATTCATTAATCAGATCATTAACGATGATTTGAGGATGAAGCTGGATAAGATAAATGGGCTTGCAGAGAAGGGTTCTATGGAGAAAGATGTTTATGGGTTTGGAATAATTCTTTTTGAGCTCATAACAGGGAAGAGACTGAATCAAACCACTGATGATTCTTCTGACAATGTTGGTCGTGGTGCTTGTGATTTTTACAGTGTCATTGATGAATTTCTGATTGGGAAAGGATTTGATGAGAAAATATTTGGGCTGATTGAAATTGCATGTGATTGTGTTAAGCCTTCTCTGGCACAGAGGCCTAAGATGGGTGATGTGTATACAAGAATAAGAGGTTTGTGGGAAGGGTATGGACCCATGTCTGGTACTGCTAGTCTCAAGCCATCCACGGTTTGTCCTGTGGGGGTAAAATGGGAAAATGAAATTGAATGCCTTCACTGA 1767 0.4007 MIPVSASLLLLACLFITGHGSDESETEIHCLKSIKQSIDPFNYLSDWNFDINLKGYNFCRFSGVQCLEIDELREVSSLNLSNMGLKGPFPRGIENCSSLQILDLSLNDISGEIPEEVANLYYLVSLKLDGNQLYGEIPHKIGLLPRIESFNVANNFLSGEVPVFTGSPHVELSYANNSGLCGDTLEPCADRSSDRSFWYSFAIAYVCSVSSVIVSFMYYFQPWRALKRRKRNAISSFRRKRQNIQSHPTQLVELLPLALQEQGIKELSALLETLIPRINFGELCEATNYFSTDNVLGFGTTGIVYKAKLPNNNYYFMAVKRLYDSQLYKTEFLLETTIPGRHRHHNIVPLVGFYLDKKERVLVYEYMSNGKLQGWLLQSDNNGPHHQAMVLEWPVRVYIALGLARGLSWLHNNCNIVHLNLSSECVLLSKDFEPKISNFGKAKFINQIINDDLRMKLDKINGLAEKGSMEKDVYGFGIILFELITGKRLNQTTDDSSDNVGRGACDFYSVIDEFLIGKGFDEKIFGLIEIACDCVKPSLAQRPKMGDVYTRIRGLWEGYGPMSGTASLKPSTVCPVGVKWENEIECLH 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00798 588 ProSitePatterns Protein kinases ATP-binding region signature. 296 320 IPR017441 GO:0005524
Accr5g00798 588 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 66 163 - -
Accr5g00798 588 SUPERFAMILY Protein kinase-like (PK-like) 280 554 IPR011009 -
Accr5g00798 588 ProSiteProfiles Protein kinase domain profile. 290 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00798 588 PANTHER LEUCINE RICH REPEAT KINASE 2 39 162 - -
Accr5g00798 588 Gene3D Transferase(Phosphotransferase) domain 1 367 559 - -
Accr5g00798 588 Pfam Protein tyrosine and serine/threonine kinase 292 493 IPR001245 GO:0004672|GO:0006468
Accr5g00798 588 Gene3D Phosphorylase Kinase; domain 1 256 366 - -
Accr5g00798 588 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Accr5g00798 588 Gene3D Ribonuclease Inhibitor 24 189 IPR032675 -
Accr5g00798 588 SUPERFAMILY L domain-like 26 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00798 Accr-Chr5 32505518 32508027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00798 25 560 Receptor kinase-like Gene Family AT3G28450 33.673 1.30e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr5g00798 PK_Tyr_Ser-Thr 5.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00798 - - pcin:129299364 831.247