Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00784 ATGGAAAATCCTACCTTTCTTCATGAATGGAATTTGAACTCTCTGGAGGATCCAAGCTTATTGCCACTAGCTGCTGCTTTTGGAGACACCTCACAACAAAATTCATTTTCTAACCCAAGAGCAACCTTGTTCAATCCCAAAACTTTCATGGAAACTTCACTACTTTCTGGCATTGAAAGGCCCCAGAAACAGACCAAACCAAACAGTACAATTAATCAGAACCAGACATTAGACACCGAGTATGATTGTTGTTCCAATAATCTTCTTTCCTTTGTCAATTCAAGTTACATAAGCCAATTGGGGTCATTAAAGCCTTATCATAAGGAGCAGATACCATGTCCTGAAATCAATAGCACAATCCCTTTTTCAAACATGTTGGCCTCTCATGAATCCTTGGGAAATCAGAACTTTGTCTTTAATGCTACTAGCCAAGACCCCAGAAAGAATATTGGACCAAGTCCTAAACTTTCTCAACCTCAAGACCACATAATTGCTGAAAGAAAGCGGCGGGAGAAGCTCGCCCAGCGATTCATTGCTCTATCTGCACTTGTCCCCGGCCTTAAAAAGACGGACAAGGCTTCTGTTCTTGGGGATGCTATAAAGTATTTGAAGCAATTGCAAGAGAGAGTGAGGGTCCTTGAAGAGGAACAGAGTAGAAGGAGCACTGTGGAATCTGTGGTAGTTGTGAAGAAAACTCAGTTATTGGCCGATGAAGGACAAGATTGTTCTTCAGACTCTGGTGATTTTGTGAAGGAGGAGCCATTACCAGAAATTGAAGCTAGATTTTGTGAGAGAAACGTCCTCATAAGAGTTCACTGTGAGAAAATAACAGGAGTGATAGAAAAAACAGTCAGCGAGATTGAAAAACTTCATCTGATAGTCACCAGTACCAGTGTCATGACATTTGGCAGTTCTGCTCTTGATATAACCATCATTGCTCAGATGGATAAGGAATTTAGCTTGAAAGTGAAGGAGCTTCTAAGAAGCCTACGCTCAGCTTTTGAATCTTTCATGTGA 1017 0.411 MENPTFLHEWNLNSLEDPSLLPLAAAFGDTSQQNSFSNPRATLFNPKTFMETSLLSGIERPQKQTKPNSTINQNQTLDTEYDCCSNNLLSFVNSSYISQLGSLKPYHKEQIPCPEINSTIPFSNMLASHESLGNQNFVFNATSQDPRKNIGPSPKLSQPQDHIIAERKRREKLAQRFIALSALVPGLKKTDKASVLGDAIKYLKQLQERVRVLEEEQSRRSTVESVVVVKKTQLLADEGQDCSSDSGDFVKEEPLPEIEARFCERNVLIRVHCEKITGVIEKTVSEIEKLHLIVTSTSVMTFGSSALDITIIAQMDKEFSLKVKELLRSLRSAFESFM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00784 338 MobiDBLite consensus disorder prediction 142 156 - -
Accr5g00784 338 Gene3D - 157 230 IPR036638 GO:0046983
Accr5g00784 338 MobiDBLite consensus disorder prediction 142 161 - -
Accr5g00784 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 219 IPR036638 GO:0046983
Accr5g00784 338 Coils Coil 196 216 - -
Accr5g00784 338 PANTHER BHLH TRANSCRIPTION FACTOR 28 334 - -
Accr5g00784 338 SMART finulus 163 212 IPR011598 GO:0046983
Accr5g00784 338 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Accr5g00784 338 CDD bHLH_AtNAI1_like 160 231 - -
Accr5g00784 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00784 Accr-Chr5 32275169 32277311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00784 157 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 55.191 1.07e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr5g00784 HLH 3.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00784 - - aprc:113852973 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00784 5 32275169 32277311 Accr5g00784 5 32275169 32277311 CCT
Accr5g00784 5 32275169 32277311 Accr5g00784 5 32275169 32277311 ECH