LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr5g00768	ATGGCTTCTTCTCACTCTCACATAGGTCTTCACACGCAACCATCCTTCTTCTTCTTCATCCTGCTTCTGCAGACAATAATAATACCTCTTGTAAATCCAATCTCCTTCAACTTCAATAATGGATTCAAGAACGGAGATTTGAAGCTCGACGGAGAAGCCCAAGTCACACGTTCAGAAATCCAAGTTACAGCCAACTCAAGGGACCGTATTTACAAGAACAGCGTCGGACGAGTGACGTGGCACCGGCCGGTGCGCCTCTGGGACGCCACGTCACCGTCCAAAACCCTCACCGACTTCTCCACCACCTTCACCTTCGTCGTCTACTCCGACCAGTTCCCTTTCGCCGACGGCCTCGCCTTCTTCCTCGCCGATCCCGACCTCCCGCCTCTTACCAACATCACACAAGGCGGTGGCCTTGGCATCATCGACGGCGACCAAGTCCTCAACTCCACCACACACCCCTTCGTCGCCGTCGAGTTTGACACGTGGCACAACTCCTGGGACCCAGATTGGGTCCACGTAGGCATTAACATCAATTCTATGCAGTCTGTACAAACCAAGCCGTGGTTCTCACATATTTATAAGGAGACGAAAACTCAAAACTGTAGTGTAAAGTACGATTCTAGTACTCTCGAGCTCACTGTTGCTTTCACCGCCGGAAACAACCGTACAGGAGGCGACTCCAGTGAGATAAACAGCTTCTCTTACAAGGTTGACTTGAGAGACTACTTACCGGAAAAAGTTATTCTAGGATTCTCCGCCGCCACAGGTGGTTTGTTTGAGGTTCATACTCTTCAGTCATGGTCGTTTAACTCAACCCTAGAAGAAGAAGAAGAAAAAGAAAAAGAAGAAGATTCCGATTCCGATTCCAAACCACAAAACAGAAGGAAGATTCTGTTTTACGTGGGGCTAGGATCTGTTATAGGCTTGTCTTTCACTTGCTTAAGCATAATATGTGTTCTTCTATGGAGGAGATCAATCAAAGCTGGAAAAGAATCATCAAAGGCAATATCAAAAGGCTTAGTTTATGATATTCACAAAATAGACGAGGAGTTTAACAAAGGCACGGGGCCTAAGAGCTTTTGCTATAATGCCCTAAAAGCAGCGACCCGTAATTTCTTAGAGTCCAGAAAGCTAGGACAAGGTGGATTTGGAGCTGTATATAAAGGCTACTTAAAAGAGTTGAGCTGCCACGTGGCCATCAAGAGAATATCAAGTAACTCAGCACAAGGTGTCAGAGAATATTCAACAGAAGTAAAAATCATTAGTCAGCTGAGGCACAGAAACTTGGTGCAACTATTAGGGTGGTGCCATAAGAAGAATGACCTACTTCTCGTGTATGAGTACATGCCGAATGGAAGCTTAGATTCCTATCTCTGCAATGACAACGACAACAAACCAAAGCCTATTAAACTGACATGGCAAGTGAGGTACAACATAGCCTTAGGGTTAGCCTCGGCATTATTATACCTTCACGAAGAATGGTCAGAATGTGTACTTCATAGAGACATAAAACCAAGCAACGTTTTGTTAGACTCCAACTTCAACGCAAAGCTAGGAGACTTTGGGTTAGCTCGCTTAGTGTCTCACGAGAGAGGTTGTAGAACAACCTTAATAGCGGGAACTAGGGGATACATAGCACCAGAATATGCCTTCACAGGGAAGATTTATAAAGAATCTGACATATACAGCTTCGGGGTGGTGTTGCTGGAGGTGGCGACAGGGAGGAGGGCGGTGGATGATGTTCAGGAGAAGGAGGCGACGGGGATATCGGTGGCGGAGTGGGTATGGGAGTTGTACGGTAAGGGGAAGGTGGGGGAAGCAGGGGATTCGAGCCTTGTCGGAGAGTACAAGGAGGAGGAGATGGAGAGAATGTTGGTGGTGGGGCTTTGGTGTACGCATCCAGAGTATAAGATGAGACCAAATTTGAGGGAAGTGATAAAGGTACTTAAGTTTGAGGCAGATTTGCCTGAGATTCCTTTGGTCATGCCTGTTCCTGTGTATCTCCCTCCTGCTTTTAAGGCTATGTTTTCTTCTGTTGAGGCCTCCTTTTGGGCCAAATGTTCAGGCCCATGA	2076	0.4672	MASSHSHIGLHTQPSFFFFILLLQTIIIPLVNPISFNFNNGFKNGDLKLDGEAQVTRSEIQVTANSRDRIYKNSVGRVTWHRPVRLWDATSPSKTLTDFSTTFTFVVYSDQFPFADGLAFFLADPDLPPLTNITQGGGLGIIDGDQVLNSTTHPFVAVEFDTWHNSWDPDWVHVGININSMQSVQTKPWFSHIYKETKTQNCSVKYDSSTLELTVAFTAGNNRTGGDSSEINSFSYKVDLRDYLPEKVILGFSAATGGLFEVHTLQSWSFNSTLEEEEEKEKEEDSDSDSKPQNRRKILFYVGLGSVIGLSFTCLSIICVLLWRRSIKAGKESSKAISKGLVYDIHKIDEEFNKGTGPKSFCYNALKAATRNFLESRKLGQGGFGAVYKGYLKELSCHVAIKRISSNSAQGVREYSTEVKIISQLRHRNLVQLLGWCHKKNDLLLVYEYMPNGSLDSYLCNDNDNKPKPIKLTWQVRYNIALGLASALLYLHEEWSECVLHRDIKPSNVLLDSNFNAKLGDFGLARLVSHERGCRTTLIAGTRGYIAPEYAFTGKIYKESDIYSFGVVLLEVATGRRAVDDVQEKEATGISVAEWVWELYGKGKVGEAGDSSLVGEYKEEEMERMLVVGLWCTHPEYKMRPNLREVIKVLKFEADLPEIPLVMPVPVYLPPAFKAMFSSVEASFWAKCSGP	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr5g00768	691	ProSitePatterns	Legume lectins alpha-chain signature.	244	253	IPR000985	-
	Accr5g00768	691	FunFam	Lectin-domain containing receptor kinase A4.3	450	670	-	-
	Accr5g00768	691	Pfam	Legume lectin domain	34	283	IPR001220	GO:0030246
	Accr5g00768	691	ProSiteProfiles	Protein kinase domain profile.	373	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g00768	691	SUPERFAMILY	Protein kinase-like (PK-like)	357	671	IPR011009	-
	Accr5g00768	691	Gene3D	-	32	288	-	-
	Accr5g00768	691	Gene3D	Phosphorylase Kinase; domain 1	358	449	-	-
	Accr5g00768	691	PANTHER	-	50	654	-	-
	Accr5g00768	691	Gene3D	Transferase(Phosphotransferase) domain 1	450	670	-	-
	Accr5g00768	691	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	499	511	IPR008271	GO:0004672\|GO:0006468
	Accr5g00768	691	Pfam	Protein kinase domain	375	590	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g00768	691	ProSitePatterns	Protein kinases ATP-binding region signature.	379	402	IPR017441	GO:0005524
	Accr5g00768	691	CDD	lectin_legume_LecRK_Arcelin_ConA	34	274	IPR001220	GO:0030246
	Accr5g00768	691	SMART	serkin_6	373	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g00768	691	SUPERFAMILY	Concanavalin A-like lectins/glucanases	33	275	IPR013320	-
	Accr5g00768	691	ProSitePatterns	Legume lectins beta-chain signature.	156	162	IPR019825	-
	Accr5g00768	691	CDD	STKc_IRAK	379	651	-	-
	Accr5g00768	691	FunFam	L-type lectin-domain containing receptor kinase IX.1	358	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr5g00768	Accr-Chr5	31848819	31850894	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr5g00768	20	668	Receptor kinase-like Gene Family	AT5G10530	43.030	1.40e-164	486

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Accr5g00768		Pkinase	1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr5g00768	-		-	gmx:100780181	737.643