Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00765 ATGGCTTCTTCCTGGTTCTTCGTTCTTCTTCTTAAGTGCATTGATTTTCTTTCATGGCCCGTGCTTGCTTTGGGCTATCCTCTATGTGCTTCCATTGAAGCAATTGAGAGTGACAGCCATTCAGAAACTCGGAATTTGATCTCTTATTGGATTCTTCTCTCACTGATATATCGGTTTGAGTATGCTTTTCGCAGGCTTCTTCAGTGGTTTCAGTATTGGCATTACATGAAGCTAATGATGGTCGCCTTCCTCATGACGCCTGACTTTGGAAGAGCTGCTTATGTCTATAATCAACTCATTAAGTCATGCATCTACATGAATCCACAAGCAGTTATAAGCAGATTCAGGAGCTGGAAGAACATATTTGCCAAGAAAGAAGACTTTAAAATGCAGGCTGAGGAGTATATAACACAGAATGGAACTGAAACCTTTGAGAAACTCCTTGCTAGCAAGAAAACAAAGCGAAGTATTCATGCAGAAACAAGAAAAGCAGTTCCAACAACTACAGAGAAGAATGAGATCCTAAAGACAAATAGAGGAAGGCTTCTCATGGAACAGAAAGACATCAAAGATTTAGAGATGATTGAAAAAGAAGTTCCCGAAGGAAATCAATTTTCAACATTGCAGGCTAATGCAGCCTTGGACAGAGTCAAATCAAATGAAAGCACTTCGTCTGCCATGGCAAAGACCGAGAAAATGCCGGCGGACACAGAACGTGGAACGTATCCTCAAATTTCTGCATATGAGAATGAGCAGAAAGAGTGGACTTGTGCCATATGCCAGTTGACAATGCCTTCTGAATCTAATTTGAATTCCCACCTGCGAGGAAGGAAGCATAAGGCTGCTTGTGAAGCACTACTGAACATGAAAACTAAAGCAATGTCGATGAAAGACAAAAGAAACCGAGCATGTGTTCAGGTTCATGCATCAAAAAATGGACAGAAAACGTGGACTTGTACCGTATGTCAGTTAACAAAGCTTTCTGAGGCTGATGTGAAGCCCCACGTGCAAGGAAAAAAGCATAAGGCTGCTTGTGAAGCACTGAACATGAAAACTAAAGCAATGTCGATGCAAGACAAAAGAAACCGAGCATGTGTTCAGGTTCATGCATCTAAAAATGGACAGAAAACGTGGACTTGTACCTTATGTCAGTTAACAAAGCTTTCTGAGGCTAATGTGAAGTCCCACTTGCAAGGAAAAAAGCATAAGGCTGCTTGTGAAGCACTGAAGATGAAAGACCAGCTGCTTGTTGCATAG 1257 0.4145 MASSWFFVLLLKCIDFLSWPVLALGYPLCASIEAIESDSHSETRNLISYWILLSLIYRFEYAFRRLLQWFQYWHYMKLMMVAFLMTPDFGRAAYVYNQLIKSCIYMNPQAVISRFRSWKNIFAKKEDFKMQAEEYITQNGTETFEKLLASKKTKRSIHAETRKAVPTTTEKNEILKTNRGRLLMEQKDIKDLEMIEKEVPEGNQFSTLQANAALDRVKSNESTSSAMAKTEKMPADTERGTYPQISAYENEQKEWTCAICQLTMPSESNLNSHLRGRKHKAACEALLNMKTKAMSMKDKRNRACVQVHASKNGQKTWTCTVCQLTKLSEADVKPHVQGKKHKAACEALNMKTKAMSMQDKRNRACVQVHASKNGQKTWTCTLCQLTKLSEANVKSHLQGKKHKAACEALKMKDQLLVA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00765 418 ProSitePatterns Zinc finger C2H2 type domain signature. 257 279 IPR013087 -
Accr5g00765 418 PANTHER OS06G0651300 PROTEIN-RELATED 200 301 - -
Accr5g00765 418 SUPERFAMILY beta-beta-alpha zinc fingers 246 288 IPR036236 -
Accr5g00765 418 SMART ZnF_U1_5 252 286 IPR003604 GO:0003676|GO:0008270
Accr5g00765 418 SMART ZnF_U1_5 314 348 IPR003604 GO:0003676|GO:0008270
Accr5g00765 418 SMART ZnF_U1_5 375 409 IPR003604 GO:0003676|GO:0008270
Accr5g00765 418 Pfam Zinc-finger of C2H2 type 378 402 - -
Accr5g00765 418 Pfam Zinc-finger of C2H2 type 255 279 - -
Accr5g00765 418 Pfam Zinc-finger of C2H2 type 317 341 - -
Accr5g00765 418 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Accr5g00765 418 SMART c2h2final6 255 279 IPR013087 -
Accr5g00765 418 SMART c2h2final6 317 341 IPR013087 -
Accr5g00765 418 SMART c2h2final6 378 402 IPR013087 -
Accr5g00765 418 MobiDBLite consensus disorder prediction 217 236 - -
Accr5g00765 418 SUPERFAMILY beta-beta-alpha zinc fingers 305 347 IPR036236 -
Accr5g00765 418 SUPERFAMILY beta-beta-alpha zinc fingers 366 408 IPR036236 -
Accr5g00765 418 Gene3D Classic Zinc Finger 229 285 - -
Accr5g00765 418 Gene3D Classic Zinc Finger 349 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00765 Accr-Chr5 31807553 31812122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00765 254 414 C2H2 Transcription Factor Family AT2G19380 24.859 3.35e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr5g00765 TB2_DP1_HVA22 1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00765 - - pcin:129306216 484.952