Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00764 ATGAAGGAGCTTACTGTTGTCTTTGTACAGACAAATAGAGGAAGGCTTCTCATGGAACAGAAAGACATCAAAGATTTAGACATGACTGAAAAAGTAGTTCCTGAAGGAAATCAAGCTAATGCAGCCTTGGACAGACTCAAATCAAATGAAAGCACTTCATCTACCATTGAAAAAACCGGAAAAATGCCGGCAGACACAGAACGTGGAACGTATCCTCAAATTTCTGCATATGAGAATGAACAGAAAGAGTGGGCTTGTGCCATATGCCAGTTGACAGTGCCTTCTGAATCTGATTTGAATTCCCACCTGCGAGGAAGGAGGCATAAGGCTGCTTGTAAAGCACTGAACATGAAAACTAAAGCAATGTCGGTGAAAGACACAAGAAACCGAGCATCTCTTCAGGTTCCTGCACCTAAAAATGTACAGAAAACGTGGACTTGTACCGTATGTCAGTTAACAAAGCTTTCCGAGGCTAATTTGAAGTCCCACCTGCAAGGAAAAAAGCATAAGGCTGCTTGTGAGGCACTGAATAGGAAAGGCCAGCTTGTTTCTGAGAAAGGTTTGCTGAAGAAGAATGACGAGGCCATTGGAGAACCAGACAAGATAATGAGTACTACTTCACATGCAACATCAGAATATAAGAAGATCACAGACAGTTATCATCCAAAAACGGAGCATAAGAATATTATTAATCAGCAGAACAAAAACAAAGATGTTGTTGATGACGCCAATACCAAGGTGCAAGAATTGCAGAAGAAGGAGGTAGGAACATCAGGACTTAAAATGAACAGTTGCAGATTCAGATGTGATATATGTAATGTAAATTGCACTTGTGAATCTGACTTGGCTTCTCACTTACGGGGTAAGAAGCACTTGGCTAAAATTCAATTACTGAGTGGTCCTAGCTAG 909 0.4092 MKELTVVFVQTNRGRLLMEQKDIKDLDMTEKVVPEGNQANAALDRLKSNESTSSTIEKTGKMPADTERGTYPQISAYENEQKEWACAICQLTVPSESDLNSHLRGRRHKAACKALNMKTKAMSVKDTRNRASLQVPAPKNVQKTWTCTVCQLTKLSEANLKSHLQGKKHKAACEALNRKGQLVSEKGLLKKNDEAIGEPDKIMSTTSHATSEYKKITDSYHPKTEHKNIINQQNKNKDVVDDANTKVQELQKKEVGTSGLKMNSCRFRCDICNVNCTCESDLASHLRGKKHLAKIQLLSGPS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00764 302 ProSitePatterns Zinc finger C2H2 type domain signature. 269 291 IPR013087 -
Accr5g00764 302 SUPERFAMILY beta-beta-alpha zinc fingers 74 119 IPR036236 -
Accr5g00764 302 MobiDBLite consensus disorder prediction 46 68 - -
Accr5g00764 302 Pfam Zinc-finger of C2H2 type 267 291 - -
Accr5g00764 302 Pfam Zinc-finger of C2H2 type 84 108 - -
Accr5g00764 302 Pfam Zinc-finger of C2H2 type 145 169 - -
Accr5g00764 302 Gene3D Classic Zinc Finger 243 297 - -
Accr5g00764 302 Gene3D Classic Zinc Finger 61 114 - -
Accr5g00764 302 Gene3D Classic Zinc Finger 118 175 - -
Accr5g00764 302 SMART c2h2final6 84 108 IPR013087 -
Accr5g00764 302 SMART c2h2final6 145 169 IPR013087 -
Accr5g00764 302 SMART c2h2final6 267 291 IPR013087 -
Accr5g00764 302 PANTHER OS06G0651300 PROTEIN-RELATED 125 299 - -
Accr5g00764 302 SUPERFAMILY beta-beta-alpha zinc fingers 121 179 IPR036236 -
Accr5g00764 302 ProSitePatterns Zinc finger C2H2 type domain signature. 86 108 IPR013087 -
Accr5g00764 302 MobiDBLite consensus disorder prediction 46 60 - -
Accr5g00764 302 SUPERFAMILY beta-beta-alpha zinc fingers 260 298 IPR036236 -
Accr5g00764 302 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676|GO:0008270
Accr5g00764 302 SMART ZnF_U1_5 264 298 IPR003604 GO:0003676|GO:0008270
Accr5g00764 302 SMART ZnF_U1_5 142 176 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00764 Accr-Chr5 31801631 31802992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00764 83 298 C2H2 Transcription Factor Family AT2G19380 22.321 2.08e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr5g00764 zf-met 3.2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00764 - - pcin:129306216 297.36