Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr5g00759 | ATGGAAAAGGCAGTTCCAACTACAGAGAAGAATGAAATGCGGCAGAACACAGCACAAAATCCTGACACAAAAACCAGAAAAAATATTCCTACCATAGAGAAGAATGAAGCACAGCAGACAAAGAAAGCAAGGCTTTCCTTGGAACTGAAAGACATTGAAATTTTGGAGATGATTGAAAAAGAGAGAAAGTCCCTGATGACAAGCCTACTCTTGTCACTTTCAATTAAAAGAAACGAGACGAATAGGGGAAGGCTTCTCATGGAACAGAAAGACATAAAAGATTTGGAGTTTACTGAAAAAGAGGAAGTTCCTGAAGGCAAGCAAGCTAATACAGCCTTGGAGAGCCTCAACTCAAATGAAAGCTCTTCATCTGCCATAGCAAAAACCGAAAAAATGGCAGCAGACGCAGAACATGGAACATTTCCTCATACTTCTGCATCTGAGAATGTACAGAAAGAGTGGACTTGTGCCATATGCCAGTTGACAATGCTTTCTGATGCCAATTTGAATTCCCACGTGCAAGGAAAGAAGCATAAAGCTACTTGTGAAGCATTGAATACGAAAACTAAAGCAACCGCGGGGACAGACAAAGGAAACAAAGCATCTACTCAGGTTTCTGCGTCTAAAAAAGTACAGAAATTTTGGACTTGTGAGATATGCCGGTTGACAATGCCTTCTGAGGCCGATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTGTAAAGCATTGGATACGAAAACTGAAGCAACTACGGGGACAGACATAGGAAACAAAGCATCTACTCAGGTTTCTGCGTCTAAAAAAGTACAGAAAATTTGGACTTGTGAGATATGCCAGTTGACAATGCTTTCTGAAGTCAATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTGTAAAGCATTGAATACGAAAACTAAAGCAACCACGGGGACAGACATAGGAAACAAAGCATCTTCTCAGGTTTGCGTCTAA | 990 | 0.4111 | MEKAVPTTEKNEMRQNTAQNPDTKTRKNIPTIEKNEAQQTKKARLSLELKDIEILEMIEKERKSLMTSLLLSLSIKRNETNRGRLLMEQKDIKDLEFTEKEEVPEGKQANTALESLNSNESSSSAIAKTEKMAADAEHGTFPHTSASENVQKEWTCAICQLTMLSDANLNSHVQGKKHKATCEALNTKTKATAGTDKGNKASTQVSASKKVQKFWTCEICRLTMPSEADLNSHLQGKKHKAACKALDTKTEATTGTDIGNKASTQVSASKKVQKIWTCEICQLTMLSEVNLNSHLQGKKHKAACKALNTKTKATTGTDIGNKASSQVCV | 329 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr5g00759 | 329 | SUPERFAMILY | beta-beta-alpha zinc fingers | 147 | 188 | IPR036236 | - | |
| Accr5g00759 | 329 | SUPERFAMILY | beta-beta-alpha zinc fingers | 201 | 247 | IPR036236 | - | |
| Accr5g00759 | 329 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Accr5g00759 | 329 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 217 | 239 | IPR013087 | - | |
| Accr5g00759 | 329 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - | |
| Accr5g00759 | 329 | PANTHER | OS06G0651300 PROTEIN-RELATED | 256 | 322 | - | - | |
| Accr5g00759 | 329 | SUPERFAMILY | beta-beta-alpha zinc fingers | 261 | 310 | IPR036236 | - | |
| Accr5g00759 | 329 | SMART | c2h2final6 | 215 | 239 | IPR013087 | - | |
| Accr5g00759 | 329 | SMART | c2h2final6 | 276 | 300 | IPR013087 | - | |
| Accr5g00759 | 329 | SMART | c2h2final6 | 154 | 178 | IPR013087 | - | |
| Accr5g00759 | 329 | Pfam | Zinc-finger of C2H2 type | 215 | 239 | - | - | |
| Accr5g00759 | 329 | Pfam | Zinc-finger of C2H2 type | 276 | 300 | - | - | |
| Accr5g00759 | 329 | Pfam | Zinc-finger of C2H2 type | 154 | 178 | - | - | |
| Accr5g00759 | 329 | MobiDBLite | consensus disorder prediction | 110 | 128 | - | - | |
| Accr5g00759 | 329 | Gene3D | Classic Zinc Finger | 195 | 245 | - | - | |
| Accr5g00759 | 329 | Gene3D | Classic Zinc Finger | 129 | 184 | - | - | |
| Accr5g00759 | 329 | Gene3D | Classic Zinc Finger | 259 | 306 | - | - | |
| Accr5g00759 | 329 | SMART | ZnF_U1_5 | 151 | 185 | IPR003604 | GO:0003676|GO:0008270 | |
| Accr5g00759 | 329 | SMART | ZnF_U1_5 | 273 | 307 | IPR003604 | GO:0003676|GO:0008270 | |
| Accr5g00759 | 329 | SMART | ZnF_U1_5 | 212 | 246 | IPR003604 | GO:0003676|GO:0008270 | |
| Accr5g00759 | 329 | MobiDBLite | consensus disorder prediction | 100 | 146 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr5g00759 | Accr-Chr5 | 31773918 | 31776961 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr5g00759 | 215 | 308 | C2H2 Transcription Factor Family | AT2G19380 | 23.529 | 3.35e-06 | 46.6 |