Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00758 ATGAACACAGAGCAATACCTTGTCCTTGATGCAGAAATGGAAAAGGCAGTTCCAACTACAGAGAAGAATGAAATGCGGCAGACAAAGAAAGCAAGGCTTTCCTTGGAACTGAAAGACATTGAAATTTTGGAGATGATTGAAAAAGAGAGAAAGTCCCTGATGACAAGCCTACTCTTGTCACTTTCAATTAAAAGAAACGAGACGAATAGGGGAAGGCTTCTCATGGAACAGAAAGACATAAAAGATTTGGAGTTTACTGAAAAAGAGGAAGTTCCTGAAGGCAAGCAAGCTAATACAGCCTTGGAGAGCCTCAACTCAAATGAAAGCTCTTCATCTGCCATAGCAAAAACCGAAAAAATGGCAGCAGACGCAGAACATGGAACATTTCCTCATACTTCTGCATCTGAGAATGTACAGAAAGAGTGGACTTGTGCCATATGCCAGTTGACAATGCTTTCTGATGCCAATTTGAATTCCCACGTGCAAGGAAAGAAGCATAAAGCTACTTGTGAAGCATTGAATACGAAAACTAAAGCAACCGCGGGGACAGACAAAGGAAACAAAGCATCTACTCAGGTTTCTGCGTCTAAAAAAGTACAGAAATTTTGGACTTGTGAGATATGCCGGTTGACAATGCCTTCTGAGGCCGATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTGTAAAGCATTGGATACGAAAACTGAAGCAACTACGGGGACAGACATAGGAAACAAAGCATCTACTCAGGTTTCTGCGTCTAAAAAAGTACAGAAAATTTGGACTTGTGAGATATGCCAGTTGACAATGCTTTCTGAAGTCAATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTGTAAAGCATTGAATACGAAAACTAAAGCAACCACGGGGACAGACATAGGAAACAAAGCATCTTCTCAGGTTTGCGTCTAA 954 0.414 MNTEQYLVLDAEMEKAVPTTEKNEMRQTKKARLSLELKDIEILEMIEKERKSLMTSLLLSLSIKRNETNRGRLLMEQKDIKDLEFTEKEEVPEGKQANTALESLNSNESSSSAIAKTEKMAADAEHGTFPHTSASENVQKEWTCAICQLTMLSDANLNSHVQGKKHKATCEALNTKTKATAGTDKGNKASTQVSASKKVQKFWTCEICRLTMPSEADLNSHLQGKKHKAACKALDTKTEATTGTDIGNKASTQVSASKKVQKIWTCEICQLTMLSEVNLNSHLQGKKHKAACKALNTKTKATTGTDIGNKASSQVCV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00758 317 SUPERFAMILY beta-beta-alpha zinc fingers 189 235 IPR036236 -
Accr5g00758 317 MobiDBLite consensus disorder prediction 98 116 - -
Accr5g00758 317 SUPERFAMILY beta-beta-alpha zinc fingers 249 298 IPR036236 -
Accr5g00758 317 PANTHER OS06G0651300 PROTEIN-RELATED 181 248 - -
Accr5g00758 317 SMART c2h2final6 203 227 IPR013087 -
Accr5g00758 317 SMART c2h2final6 142 166 IPR013087 -
Accr5g00758 317 SMART c2h2final6 264 288 IPR013087 -
Accr5g00758 317 SUPERFAMILY beta-beta-alpha zinc fingers 135 176 IPR036236 -
Accr5g00758 317 SMART ZnF_U1_5 139 173 IPR003604 GO:0003676|GO:0008270
Accr5g00758 317 SMART ZnF_U1_5 200 234 IPR003604 GO:0003676|GO:0008270
Accr5g00758 317 SMART ZnF_U1_5 261 295 IPR003604 GO:0003676|GO:0008270
Accr5g00758 317 Gene3D Classic Zinc Finger 247 294 - -
Accr5g00758 317 Gene3D Classic Zinc Finger 117 172 - -
Accr5g00758 317 Gene3D Classic Zinc Finger 183 233 - -
Accr5g00758 317 Pfam Zinc-finger of C2H2 type 264 288 - -
Accr5g00758 317 Pfam Zinc-finger of C2H2 type 203 227 - -
Accr5g00758 317 Pfam Zinc-finger of C2H2 type 142 166 - -
Accr5g00758 317 ProSitePatterns Zinc finger C2H2 type domain signature. 205 227 IPR013087 -
Accr5g00758 317 MobiDBLite consensus disorder prediction 88 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00758 Accr-Chr5 31772973 31776961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00758 203 296 C2H2 Transcription Factor Family AT2G19380 23.529 2.86e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00758 - - pcin:129306216 194.126