Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00757 ATGAACACAGAGCAATACCTTGTCCTTGATGCAGAAATGGAAAAGGCAGTTCCAACTACAGAGAAGAATGAAATGCGGCAGACAAAGAAAGCAAGGCTTTCCTTGGAACTGAAAGACATTGAAATTTTGGAGATGATTGAAAAAGAGAGAAAGTCCCTGATGACAAGCCTACTCTTGTCACTTTCAATTAAAAGAAACGAGACGAATAGGGGAAGGCTTCTCATGGAACAGAAAGACATAAAAGATTTGGAGTTTACTGAAAAAGAGGAAGTTCCTGAAGGCAAGCAATTTTCAACGTTGCAGGCTAATACAGCCTTGGAGAGCCTCAACTCAAATGAAAGCTCTTCATCTGCCATAGCAAAAACCGAAAAAATGGCAGCAGACGCAGAACATGGAACATTTCCTCATACTTCTGCATCTGAGAATGTACAGAAAGAGTGGACTTGTGCCATATGCCAGTTGACAATGCTTTCTGATGCCAATTTGAATTCCCACGTGCAAGGAAAGAAGCATAAAGCTACTTGTGAAGCATTGAATACGAAAACTAAAGCAACCGCGGGGACAGACAAAGGAAACAAAGCATCTACTCAGGTTTCTGCGTCTAAAAAAGTACAGAAATTTTGGACTTGTGAGATATGCCGGTTGACAATGCCTTCTGAGGCCGATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTGTAAAGCATTGGATACGAAAACTGAAGCAACTACGGGGACAGACATAGGAAACAAAGCATCTACTCAGGTTTCTGCGTCTAAAAAAGTACAGAAAATTTGGACTTGTGAGATATGCCAGTTGACAATGCTTTCTGAAGTCAATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTGTAAAGCATTGAATACGAAAACTAAAGCAACCACGGGGACAGACATAGGAAACAAAGCATCTTCTCAGGTTTGCGTCTAA 969 0.4138 MNTEQYLVLDAEMEKAVPTTEKNEMRQTKKARLSLELKDIEILEMIEKERKSLMTSLLLSLSIKRNETNRGRLLMEQKDIKDLEFTEKEEVPEGKQFSTLQANTALESLNSNESSSSAIAKTEKMAADAEHGTFPHTSASENVQKEWTCAICQLTMLSDANLNSHVQGKKHKATCEALNTKTKATAGTDKGNKASTQVSASKKVQKFWTCEICRLTMPSEADLNSHLQGKKHKAACKALDTKTEATTGTDIGNKASTQVSASKKVQKIWTCEICQLTMLSEVNLNSHLQGKKHKAACKALNTKTKATTGTDIGNKASSQVCV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00757 322 SMART ZnF_U1_5 205 239 IPR003604 GO:0003676|GO:0008270
Accr5g00757 322 SMART ZnF_U1_5 266 300 IPR003604 GO:0003676|GO:0008270
Accr5g00757 322 SMART ZnF_U1_5 144 178 IPR003604 GO:0003676|GO:0008270
Accr5g00757 322 SUPERFAMILY beta-beta-alpha zinc fingers 194 240 IPR036236 -
Accr5g00757 322 PANTHER OS06G0651300 PROTEIN-RELATED 184 253 - -
Accr5g00757 322 ProSitePatterns Zinc finger C2H2 type domain signature. 210 232 IPR013087 -
Accr5g00757 322 Pfam Zinc-finger of C2H2 type 269 293 - -
Accr5g00757 322 Pfam Zinc-finger of C2H2 type 208 232 - -
Accr5g00757 322 Pfam Zinc-finger of C2H2 type 147 171 - -
Accr5g00757 322 SUPERFAMILY beta-beta-alpha zinc fingers 140 181 IPR036236 -
Accr5g00757 322 SMART c2h2final6 269 293 IPR013087 -
Accr5g00757 322 SMART c2h2final6 147 171 IPR013087 -
Accr5g00757 322 SMART c2h2final6 208 232 IPR013087 -
Accr5g00757 322 Gene3D Classic Zinc Finger 188 238 - -
Accr5g00757 322 Gene3D Classic Zinc Finger 122 177 - -
Accr5g00757 322 Gene3D Classic Zinc Finger 252 299 - -
Accr5g00757 322 SUPERFAMILY beta-beta-alpha zinc fingers 254 303 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00757 Accr-Chr5 31772973 31776961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00757 208 301 C2H2 Transcription Factor Family AT2G19380 23.529 3.09e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00757 - - pcin:129306216 207.994