Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00756 ATGGCTTCTTCCTGGTTCTTCATTCTCCTCCTTAAATGCATTGATTTTCTTTCATGGCCCGTGCTTGCTTTGGGCTATCCTCTATGTGCTTCCGTTGAAGCAATTGAGAGTGACAGCCATTCAGAAACTCGGAATTTGATCTCTTATTGGATTCTTCTCTCACTTATATACCTCTTTGAGTATGCTTTTCTCAAGCTTCTTCAATGGTTTCAGTATTGGCATTACATGAAGCTGATGATTGTAGCCTTCCTCGTGACGCCGGACTTTGGAAGAGCCGCATATATCTATGATCAACTCATTCGGTCTTGCATCTACATGAATCCACAAGAAGTCATAAGCAGATTCAGGAGCTGGAAGAACAGATTTGCCAAGAAAGAAGACTTAATTATGCATGTTGAGAAGTGTATAACACAGAATGGAACTGAAGCCTTAGAGAAACTCATTGCTAGCAAGAACACAGAGCAAAGTCTTCATGCAGGAACAAGAAAAGCAGTTCCAACATGTACAGAGAAGATTGAGATCCTAAAGACAAATAGAGGAAGGCTTCTCATGGAACAGAAAGACATCAAAGATTTGGAGGTGATTGAAAAGGAGGAAGTTCGTGAAGGCAAGCAAGCTAATAATGCAGCCTTGGATGGACTCACATCAAAATCCGCCATGGAAACAACCGAAAAAATGCCGGCAGACACAGAATATGGAAAATATCCTCAGATTTCTGCAACTGAGAATGTACAGAAAGAGTGGACTTGTGCCATATGCCAGTTTACAGTGCCTTCTGAAGCTAAGTTGAATTCCCACCTGCAAGGAAGAAAGCACAAGGCTGCTTGTGAAGCGCTGAACACGAAAACTAAAGCGACACCGGTGAAAGACACAGGAAGCGGAGCATCTCCTCAGGTTTTTGCGTCTGAAAATGTACAGAAAACTTGGACTTGTGACATATGCCTGTTGATAATGTTAGAGGTTAATAAGTATTCCCATCTGCGAGGAAAGAAGCATAAGGCTGCGATGAAAGAAGCACTTAAAACGAAAACTGAAGGAACGGCGGGGACAGATACCGGAAACGGGGCATCTCCTCATGTTTCTGCATCTACAAATGTACAGAAAACGTGGACTTGTGCCGTATGTCAGTTAACAAAGCTTTCTGAGGCTAATGTGAAGTCCCACCTGCAAGGACGACAGCACAAGGCTGTTCTTGAAGCATTGGATCGAAAACTAAGCGACACCGGTGAAAGACACAGGAAGCAAGCATCTCCTCAGGTTTCAGCATCTCAAAATGAGCAGAAAAGGTGGACGTGTGAGATATGTCAGTTGACGAAACTTTCTTTTACTGATTTGAATTCTCACATTCAAGGAAGGAAGCATAAGGCTTCTCTTGAAGCACTGAGCGCGAAAACTGAAGGGACCGTGGTGGCAGACACAGGAAGTGAAACATTTCCTCAGGTTTCTGGGTTTATAAATGAACAGACAGAGTGGACTTGGAAAGTTGGAGAGTTTGAGTTCCCACCTGCAAGGAAAGAATCATAA 1524 0.4318 MASSWFFILLLKCIDFLSWPVLALGYPLCASVEAIESDSHSETRNLISYWILLSLIYLFEYAFLKLLQWFQYWHYMKLMIVAFLVTPDFGRAAYIYDQLIRSCIYMNPQEVISRFRSWKNRFAKKEDLIMHVEKCITQNGTEALEKLIASKNTEQSLHAGTRKAVPTCTEKIEILKTNRGRLLMEQKDIKDLEVIEKEEVREGKQANNAALDGLTSKSAMETTEKMPADTEYGKYPQISATENVQKEWTCAICQFTVPSEAKLNSHLQGRKHKAACEALNTKTKATPVKDTGSGASPQVFASENVQKTWTCDICLLIMLEVNKYSHLRGKKHKAAMKEALKTKTEGTAGTDTGNGASPHVSASTNVQKTWTCAVCQLTKLSEANVKSHLQGRQHKAVLEALDRKLSDTGERHRKQASPQVSASQNEQKRWTCEICQLTKLSFTDLNSHIQGRKHKASLEALSAKTEGTVVADTGSETFPQVSGFINEQTEWTWKVGEFEFPPARKES 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00756 507 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Accr5g00756 507 SUPERFAMILY beta-beta-alpha zinc fingers 357 401 IPR036236 -
Accr5g00756 507 SUPERFAMILY beta-beta-alpha zinc fingers 239 282 IPR036236 -
Accr5g00756 507 SMART c2h2final6 430 454 IPR013087 -
Accr5g00756 507 SMART c2h2final6 248 272 IPR013087 -
Accr5g00756 507 SMART c2h2final6 370 394 IPR013087 -
Accr5g00756 507 SUPERFAMILY beta-beta-alpha zinc fingers 418 461 IPR036236 -
Accr5g00756 507 PANTHER OS06G0651300 PROTEIN-RELATED 204 288 - -
Accr5g00756 507 Gene3D Classic Zinc Finger 354 400 - -
Accr5g00756 507 Gene3D Classic Zinc Finger 224 278 - -
Accr5g00756 507 Gene3D Classic Zinc Finger 409 460 - -
Accr5g00756 507 SMART ZnF_U1_5 245 279 IPR003604 GO:0003676|GO:0008270
Accr5g00756 507 SMART ZnF_U1_5 367 401 IPR003604 GO:0003676|GO:0008270
Accr5g00756 507 SMART ZnF_U1_5 306 339 IPR003604 GO:0003676|GO:0008270
Accr5g00756 507 SMART ZnF_U1_5 427 461 IPR003604 GO:0003676|GO:0008270
Accr5g00756 507 Pfam Zinc-finger of C2H2 type 248 272 - -
Accr5g00756 507 Pfam Zinc-finger of C2H2 type 370 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00756 Accr-Chr5 31726715 31730177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00756 309 463 C2H2 Transcription Factor Family AT2G19380 22.543 4.04e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00756 - - pcin:129306216 462.611