Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00716 ATGGCTTCCCTTCTTCATCCATCTGTAGCACTAGATAGTAGCTCTAAAGTTGTAGAACTACAAACCAGTCATGATTTTATTACCCCATTGGAGAACACCGCGATCAAGCCAACAGATAGAAGCAAAGGTACTCAGAAAGAGGATGATGGGGTTTTCATTACATGGGAAGACTTGTGGGTGACTGTTGGTAGTGGAAAGAATAAAAAACCATTATTGCAGAATCTCACTGGGTATGCCAAACCAGGACAGCTTTTGGCCATAATGGGTCCTTCAGGATGCGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAGCAAGCAGCAAACAGGGAAGATTCTTATCAACGGGCACAGACAGGCGCTAGCTTATGGAACATCAGCATATGTCACCCAAGATGATGCCATGTTGTCAACTTTAACAGCTGGGGAAGCTTTGTATTACTCATGTCAGCTGCAACTTCCTGATTCCATGTCCATGGAGGAGAAGAAGGAGAGAGCGGACTCTACACTCAGAGAAATGGGTCTACAAGATGCCATCAGCACAAGGATTGGAGGATGGACTTCAAAAGGCCTTAGCAGTGGACAAAAGAGACGACTTAGCATTTGCATTGAGATTATAACACGTCCGAAACTTCTCTTCCTTGATGAACCGACTAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAACATAAGGGATGGCATTCAAAGAACAATTGTAGCATCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCATAATCTCTGTCTTCTGTCTTCTGGCGAAACAGTATATTTTGGCCCTGCATCTGAGGCAAATGAGTTCTTTGCTACAAATGGTTTTCCTTGTCCAAGTCTCTACAATCCTTCTGACCATTTCTTAAAGATCATAAACAAGGATTTTGAACAGGATCCAGAAGAAGGCTTTGGCACAAGAGAAACCACAGAAGAAGCGATTAATATCCTTGTAGAGTCCTATAAGTCATTTGAAATTCGCAAACAAATTCTGAAGGAAGTGGAAGAAATAAGCGAAAGTGATTCTGATGCGATAGCGAAAAAGAGAATCAATGCTGCATTCCTCACTCAGTGCCTTGTTCTTATCAGAAGATCTTCCCTGCATATGTACCGTGACATGAGCAATTATTGGTTACGTCTCGCTGTATATGTCGCAATAGCTATAAGTCTGGGTACTATGTTCTATAACGTGGGCTCAAGTATTGAATCTATTCAGGCTAGAGGATCGCTGCTCACATTTTTCGTTTCAGTCCTCACTTTTATAACTCTTATTGGTGGATTCCCTCCATTTTTAGAGGAAATGAAGGTATTTAAACGAGAGAGATTGAATGGACACTACGGTGTCACTGCTTTTCTGATTGGCAACACATTATCTTCTATTCCATACATGCTACTGATATCTCTGATACCTGGGGGAATAGTTTATTTCCTTTCTGGGCTGCACAAAGGACTCGAACACTTTTTGTATCTGACGTCTGTGTTGTTTGCCACTGTTATGTCTGTTGAGAGCCTCATGATGGTTGTTGGGAGCTTCTTCCCCAATTTCATAATGGGGATGATCATTGTTGGTGGAATTCAAGGAGTCATGATATTACTTGGCGGTTTCTATAGACTGCCAGATGATCTGCCCAAGCCATTTTGGAGATACCCGTTATATTATGTTTCATTCCACAAGTATGCCTTCCAAGGGTTGTTCAAGAATGAATTTGAAGGTTTAACATTTGCCACTGCTCATGATGGAGACAGAAAAACCACTAGTGGTAGAGAAATTCTGACAAACACATGGCAAGTGGAAATGGGCTACTCTAAGTGGGTTGATCTTGCTATCTTGCTCGGAATGATTTTTCTATATCGGCTTCTGTTCTTGGCCATTACTAAGACCAAGGAGAATGCAAAGCCTATTGTTGCAGGTATCGGTTGTGCCCCAAGCAAAATTACGATGACCCGAAGGAATTAG 2010 0.4194 MASLLHPSVALDSSSKVVELQTSHDFITPLENTAIKPTDRSKGTQKEDDGVFITWEDLWVTVGSGKNKKPLLQNLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLGSSKQQTGKILINGHRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSMEEKKERADSTLREMGLQDAISTRIGGWTSKGLSSGQKRRLSICIEIITRPKLLFLDEPTSGLDSAASYYVMSRIASLNIRDGIQRTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASEANEFFATNGFPCPSLYNPSDHFLKIINKDFEQDPEEGFGTRETTEEAINILVESYKSFEIRKQILKEVEEISESDSDAIAKKRINAAFLTQCLVLIRRSSLHMYRDMSNYWLRLAVYVAIAISLGTMFYNVGSSIESIQARGSLLTFFVSVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTLSSIPYMLLISLIPGGIVYFLSGLHKGLEHFLYLTSVLFATVMSVESLMMVVGSFFPNFIMGMIIVGGIQGVMILLGGFYRLPDDLPKPFWRYPLYYVSFHKYAFQGLFKNEFEGLTFATAHDGDRKTTSGREILTNTWQVEMGYSKWVDLAILLGMIFLYRLLFLAITKTKENAKPIVAGIGCAPSKITMTRRN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00716 669 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Accr5g00716 669 Pfam ABC transporter 72 223 IPR003439 GO:0005524
Accr5g00716 669 SMART AAA_5 81 270 IPR003593 GO:0016887
Accr5g00716 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 290 IPR027417 -
Accr5g00716 669 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 298 IPR003439 GO:0005524
Accr5g00716 669 Gene3D - 52 308 IPR027417 -
Accr5g00716 669 Pfam ABC-2 type transporter 374 587 IPR013525 GO:0016020|GO:0140359
Accr5g00716 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 44 655 - -
Accr5g00716 669 Pfam ABC-2 type transporter 255 362 IPR043926 GO:0140359
Accr5g00716 669 FunFam ABC transporter G family member 11 51 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00716 Accr-Chr5 31012219 31015470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00716 71 233 Calmodulin-binding Proteins AT2G36910 28.249 4.70e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00716 K05681 - gmx:100790102 936.791