Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00711 ATGGGGAAGACCAAAGGTATGGGAGCTGCCCGCAAACTGCAGTCCCACCGCAGAAGGCAGAGGTGGGCTGATAAGTCATACAAGAAGTCTCACCTTGGAAATGAATGGAAGAAACCTTTTACTGGATCTTCCCAAGGTATTGTTCTTGAAAAGATAGGTATTGAGGCTAAGCAGCCAAACTCTGCCATTCGTAAGTGTGCCAGGGTTCAACTTATCAAGAATGGGAAGAAGATTGCTGCCTTTGTCCCTAACGATGGTTGCTTGAAAGAAAGAGAAAGAGTTCTGCTATGGACATTGACCAGAAGAAAGAAAGAAAGAGAAAAGAAAATAAAAAGTCAGAAACGGAAGTTACTGTAG 357 0.4342 MGKTKGMGAARKLQSHRRRQRWADKSYKKSHLGNEWKKPFTGSSQGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLKERERVLLWTLTRRKKEREKKIKSQKRKLL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00711 118 SUPERFAMILY Nucleic acid-binding proteins 20 97 IPR012340 -
Accr5g00711 118 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 89 IPR006032 GO:0003735|GO:0005840|GO:0006412
Accr5g00711 118 MobiDBLite consensus disorder prediction 1 38 - -
Accr5g00711 118 FunFam 40S ribosomal protein S23 25 108 - -
Accr5g00711 118 ProSitePatterns Ribosomal protein S12 signature. 57 64 IPR006032 GO:0003735|GO:0005840|GO:0006412
Accr5g00711 118 Gene3D - 25 116 IPR012340 -
Accr5g00711 118 MobiDBLite consensus disorder prediction 10 25 - -
Accr5g00711 118 Pfam Ribosomal protein S12/S23 33 100 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00711 Accr-Chr5 30908000 30908356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00711 1 102 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 76.636 1.03e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00711 K02973 - bvg:104886853 173.326