Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00681 ATGGATAATCTTTGCTGCTTCAACTTTGTCTCTAAGGCTGTTGGTGGGCGTTCTTCATGTAGCTCTGGCAAGGGCAGAAGCCATCAATTCCCAGTCAAGTATGGCTTCTGCCTTGTTAAAGGGAAAGCAAGCCACCCAATGGAGGACTATCATGTAGCAAAACTTGTCCAGTACAGAGGACAAGAAGTTGGGCTGTTTGCTATATATGATGGGCACTTGGGAGACAGTGTACCAGCCTATCTACAAAAGCATCTGTTTTCTAATATATTAAAAGATGAGGAATTCTGGACTGATCCGAACAGGTCAATTATCAAAGCCTATGAGACAACAGATCAGGCAATTCTATCTCACAGCGCTGATTTGGGGCGAGGTGGATCTACTGCGGTGACTGCAATTCTTTTAAATAATCAGAAATTATGGATAGCTAATGTTGGAGATTCACGAGCAGTTATGTCAAGGGGAGGGTCGGCTATACAGATGAGTATTGATCATGAGCCTAACAGTGAGCGGGACAGTATTGAGGACAGAGGCGGCTTTGTCTCAAACTTGCCAGGGGATGTTGCAAGAGTGAATGGCCAACTTGCAGTTTCTCGAGCATTTGGGGACAAAAACCTAAAATCACACTTGCGATCTGACCCCGACATACGGCTTGTTGATATTTATCCAGATTCTGAGCTTTTGATTCTTGCAAGTGATGGCCTATGGAAGGTTATGGCAAATCAAGAGGCAGTCGATGTTGCAAGAAGGACTAAGGACCCACAAAAGGCAGCAAAACAACTAGTTTCTGAGGCGTTGAAGCGAGAGAGCAAAGACGATATTTCCTGCATTGTTGTTCGTTTCAAGGGATGA 849 0.4452 MDNLCCFNFVSKAVGGRSSCSSGKGRSHQFPVKYGFCLVKGKASHPMEDYHVAKLVQYRGQEVGLFAIYDGHLGDSVPAYLQKHLFSNILKDEEFWTDPNRSIIKAYETTDQAILSHSADLGRGGSTAVTAILLNNQKLWIANVGDSRAVMSRGGSAIQMSIDHEPNSERDSIEDRGGFVSNLPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRLVDIYPDSELLILASDGLWKVMANQEAVDVARRTKDPQKAAKQLVSEALKRESKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00681 282 CDD PP2Cc 32 280 IPR001932 -
Accr5g00681 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Accr5g00681 282 Gene3D - 29 282 IPR036457 -
Accr5g00681 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Accr5g00681 282 SMART PP2C_4 25 278 IPR001932 -
Accr5g00681 282 SUPERFAMILY PP2C-like 26 281 IPR036457 -
Accr5g00681 282 FunFam Probable protein phosphatase 2C 39 23 281 - -
Accr5g00681 282 PANTHER PROTEIN PHOSPHATASE 28 280 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00681 Accr-Chr5 30206955 30211948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00681 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 6.24e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00681 K17506 - jre:108990886 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00681 5 30206955 30211948 Accr5g00681 5 30206955 30211948 CCT
Accr5g00681 5 30206955 30211948 Accr5g00681 5 30206955 30211948 ECH