Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00680 ATGGCGGAGCGTGATTCTTACGGGCTGGGTCCTCGATTAGATATACAGCAATTACAATTTGAAGCTCAGCATCGATGGTTGCGGCCTGCTGAAATTTGTGAAATTCTTCGTAATTATCAGATGTTTCAAATCACATCAGAACCTCCAAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTGTTGAGGTATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAGGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACAGGATATGATGCACATTGTTTTCGTCCACTATTTAGAAGTTAAGGGTCATAAGACAAGTGTTGGAGCAAAACCAGATATTGATGAAGTTTCATCAGATTCCCAAAGAGGCAGTTCTGCATCATCATCTGGGTTTTCGAGAAATTATAATACTGTGCCTTCAAGAAGTACAGATTCCTTGAGCCCAACTAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCGTGCACAGTCATTGATTTCTGGAGCGGACTATATTTCACATGTTCAGCGAGATAAACCTAGAGGCAGTGATGCTAGTACTTCTTTCATTGATAGCCAAAAAACAAATGGAATGGCCTTACAGGACAATGGCTTTGGACAATTTACAAATGGATTATCTACTGATCCATCCCTTGTTTCATTTACTTCCATCCCATCCGATACGATAGGAAACATGCTTGAACCAGAAAATACTATTCCAGGTGACCTTTTAGCCATAAAAAATGTCTTCACTGGGCCAGCTGCGAGTTCTCAGTCCCTCCAATCAAATTGGCCGATACCGTTTGGAGGTAATCCAGGACAGATGTCCAAAGAGCTTACAACCCAATCGCTTGGTTTGGAATTTGGATCTGATTTTAGCCATGGTTTGCTGGAACATGAAACAAACGATGATGTTGCTTCTGGCTTGGTAACTTTTAACTGTCAGCAAGGAGAGGAGCCTGTGCTGGAAAACTTTCCAGAGCAGCATACAGATACTCAATCTCAAAATTTTCTGAAATACAATTTTGGGAAGGAAGTTCCACCAGAAGAAAGCATTAATTATGCCGCCTTGACTGTGAAGCGGTCCTTATTAGATGGGGAAGAAAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATTACTAAAGAACTTGAAGAGGTGGATGATCTTCATATGCAGTCATCACCTGGTATCTCTTGGAGCGCTGATGAATGTGGGAATGTGATAGATGACTCCTCATTGAGCCCCTCCCTCTCTCAGGACCAGCTGTTTAGCATAAATGATTTTTCGCCTACCTGGGCATATGCTGAATCAGAAACAGAGGTTTTGATCATTGGAACATTTTTGAGGAATCAAACAGAGGTAGCTAATTATAACTGGTCGTGCATGTTTGGGGAAGTTGAGGTTCCTGCCGAGGTTCTAGCTAGTGGAATTCTGTGCTGTCAGGCTCCACCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTATGCAGAGAGCTTCGCTGAAAATGTTGATGTTTCAGATTTCTATATCAGTTCAACTGAGATACAGCTTCATCTGAGACTAGAGAAGCTACTTTCTTCAAAATCTGCGCTCTCTGCAAATTACAGCTTTGACAATGATATGGTGAAAAGAAACTTAATGTTTAAGCTCATTACGCTAAAGGAGGAAGAGGCATTCTCTGACAGGGAAGAGCTGATGTCAGAGAAGGATGCTTCCCAGCAAAAGGTGAAGGAGTTAATATTTTACAGGCAAGTTAAAGAGAAGCTGTACTCTTGGCTGCTTCGCAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAGGTGTGCTTCATTTTGCAGCTGCTCTTGGTTATGATTGGGCAATAATGCCAATCGTTATTGCTGGAGTAAATATCAATTATCGGGACATGAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGCAGGGAACGAACAGTTGCTGTACTTGTCTCCATGGGTGCAGCTGCTGGAGCATTGACAGATCCGTCCCCAACGTTTCCCTCTGGTAGAACAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCAGAGTCATCATTAACCAGCCACCTTTCAACTCTCACAATGAATGATCAGAAGGGAGATGTTGTGCAAAGAGCTTCAGATGTAGAAGAAGTTCAGACAGTTTCAAAACGAACTGCAACACCAGGGTTTAGTGGTGATATGCCAGATGCCCTCTGCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACACAGGCGGCTGATCGTATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTGACCCAGCTTGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCCCTTGTAGCTTCTAAGGCGTGCAAGGCTGGATATGGAGATGATTTAGCCTATACCGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTTCTAATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGCAGCATAAATCAGTCCTCTGGTCTGTCGGAATTTTGGAGAAGGTAATATTGCGATGGAGACGCAAGGGCAGTGGTTTACGCGGATTCCGATTAGATGCTAATAAAATCCCCCCAAAGCAAGATGAGACTGTGAAAGAAGATGATTACGATGTTCTCAAGGAAGGGAGAAAACAAAGTGAGGAAAGGTTCCAAAAGGCGCTTTCCAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTCTGCTAAATGTTGTTGAGGACTTTCGGCAAACAAAGGCATGTGATACGGATGTGATCAATTCAGAAGAGACAGTCGATGGTGTAGAGGACCTTATTGACATTAACATGCTCTTAGATGATGAAAATTTCATACCCATAGCATTTGATTGA 3147 0.428 MAERDSYGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYQMFQITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKGHKTSVGAKPDIDEVSSDSQRGSSASSSGFSRNYNTVPSRSTDSLSPTSTLTSLCEDADSGDRAQSLISGADYISHVQRDKPRGSDASTSFIDSQKTNGMALQDNGFGQFTNGLSTDPSLVSFTSIPSDTIGNMLEPENTIPGDLLAIKNVFTGPAASSQSLQSNWPIPFGGNPGQMSKELTTQSLGLEFGSDFSHGLLEHETNDDVASGLVTFNCQQGEEPVLENFPEQHTDTQSQNFLKYNFGKEVPPEESINYAALTVKRSLLDGEESLKKVDSFSRWITKELEEVDDLHMQSSPGISWSADECGNVIDDSSLSPSLSQDQLFSINDFSPTWAYAESETEVLIIGTFLRNQTEVANYNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYAESFAENVDVSDFYISSTEIQLHLRLEKLLSSKSALSANYSFDNDMVKRNLMFKLITLKEEEAFSDREELMSEKDASQQKVKELIFYRQVKEKLYSWLLRKVIEDGKGPNVLDEEGQGVLHFAAALGYDWAIMPIVIAGVNINYRDMNGWTALHWAASYGRERTVAVLVSMGAAAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMNDQKGDVVQRASDVEEVQTVSKRTATPGFSGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQLEDDEFGLSDQQALSLVASKACKAGYGDDLAYTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQHKSVLWSVGILEKVILRWRRKGSGLRGFRLDANKIPPKQDETVKEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACDTDVINSEETVDGVEDLIDINMLLDDENFIPIAFD 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00680 1048 SMART CG_1_2 18 136 IPR005559 GO:0003677
Accr5g00680 1048 Gene3D - 873 919 - -
Accr5g00680 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 922 IPR027417 -
Accr5g00680 1048 SMART ANK_2a 697 726 IPR002110 GO:0005515
Accr5g00680 1048 SMART ANK_2a 736 765 IPR002110 GO:0005515
Accr5g00680 1048 SMART iq_5 872 894 IPR000048 GO:0005515
Accr5g00680 1048 SMART iq_5 895 917 IPR000048 GO:0005515
Accr5g00680 1048 MobiDBLite consensus disorder prediction 209 228 - -
Accr5g00680 1048 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Accr5g00680 1048 FunFam Calmodulin-binding transcription activator 2 457 553 - -
Accr5g00680 1048 Gene3D Immunoglobulins 457 553 IPR013783 -
Accr5g00680 1048 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1010 - -
Accr5g00680 1048 ProSiteProfiles Ankyrin repeat region circular profile. 697 722 - -
Accr5g00680 1048 Pfam IQ calmodulin-binding motif 876 893 IPR000048 GO:0005515
Accr5g00680 1048 Pfam IQ calmodulin-binding motif 898 917 IPR000048 GO:0005515
Accr5g00680 1048 ProSiteProfiles IQ motif profile. 873 902 IPR000048 GO:0005515
Accr5g00680 1048 Pfam Ankyrin repeats (3 copies) 669 758 IPR002110 GO:0005515
Accr5g00680 1048 SUPERFAMILY Ankyrin repeat 647 758 IPR036770 -
Accr5g00680 1048 SUPERFAMILY E set domains 464 549 IPR014756 -
Accr5g00680 1048 MobiDBLite consensus disorder prediction 146 193 - -
Accr5g00680 1048 MobiDBLite consensus disorder prediction 153 192 - -
Accr5g00680 1048 ProSiteProfiles IQ motif profile. 896 920 IPR000048 GO:0005515
Accr5g00680 1048 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Accr5g00680 1048 ProSiteProfiles Ankyrin repeat profile. 697 729 IPR002110 GO:0005515
Accr5g00680 1048 Gene3D - 623 769 IPR036770 -
Accr5g00680 1048 FunFam Calmodulin-binding transcription activator 2 873 920 - -
Accr5g00680 1048 Pfam IPT/TIG domain 464 542 IPR002909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00680 Accr-Chr5 30182751 30192501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00680 1 1029 CAMTA Transcription Factor Family AT5G64220 52.247 0.0 1029
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Accr5g00680 CG-1 5.5e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00680 K21596 - gmx:100795682 1424.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00680 5 30182751 30192501 Accr5g00680 5 30182751 30192501 CCT