Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00678 ATGCAGTTATTTCGCCATTTTAGTGCAAAAGAGGGGTTGTCTGGAGTCAATGATTCAGGAAGAGACAGTTTCCTCCAAGTGTTTGAAAGGAAGATGGAGGAAAAGCACAGACAGTTGAAAGAAAGCGGGCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCCTTGTTGGCCATCTTTCTCATTTCCTTGGAGCGAAGGCACCTTGGATCCATGTATTTCATTCCACTGGGTTTCACCTGTCCCTGTCTTTGTTTACACTGGTTGGTCCAGGGCGTCAACTTATTCTTGATGGCATAAGAAGCCTTCTTAAAAATGCACCAAACATGAACACATTAGTTGGTCTTGGAGCTTTGTCATCATTTTCCGTCAGCCTATTTGCTGCCTTGCTGCCCAACTTGGGCTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTAGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTCTTAGTATATTGCCATCAAAAGCTCGCCTTCTGGTTAGCAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCGAATCCTTGTGCTTCCTGGAGATCGTATTCCCGCAGATGGAATTGTCAGAACTGGTAGAAGCACTGTAGATGAGTCAAGTTTTACTGGAGAGCCTTTGCCAGCAACAAAACTACCTGGGAATCAGGTTGCTGCTGGGAGTATAAATCTAAATGGCACTCTTACAATTGAAGTGCAGAGACCAGGCAATGAGACCGCCATGGGAGACATCATTCGCCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTAATGGCTGCTTCTGCAGCCACATTTACATTCTGGAGTCTGTTTGGCACACGCATTCTACCTGCTGCTCTTTATCAAGGAACTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCCACACCTACAGCTGTGCTGGTTGGAACTTCTTTAGGAGCTACAAAAGGATTACTTTTACGGGGTGGAAACATTCTGGAGAAGTTTTCAATGGTAGATGCTATTGTATTTGACAAAACAGGGACCTTGACGATTGGAAGACCTGTTGTGACCAGGATTGTCAATACAAGTGGACAAAACAAAAACTTAAGGTATACTGCAGACAATGATTGGTCAGACATTGAAGTTCTGAGATTGGCTGCTGGAGTAGAATCAAATACAGTACATCCAGTCGGTAAAGCAATTGTAGAAGCTGCTCAGGCAGTTAATTGTCACAATGCAAAGGTAGCAGATGGAACATTTTTGGAAGAACCTGGATCTGGTGCAGTAGCAATTATCAATAACAATAAGGTTTCAGTTGGGACTTTGGAATGGCTCACCAGGCAGGGAGTTAACAAAAATATTCATCAAGAAGTTGAGGACTATAGAAATCAGTCTGTTGTTTACGTGGGAGTAAATGATACTGTAGCTGGCCTTGTATATTTTGAAGACCAGATAAGGGAAGATGCAAGACATGTTGTTGAAGCTTTGTCTAAACAAGGAATTGGTGTTTATATGCTCTCAGGAGACAAAAGGAGTACGGCTGAGTATGTTGCATCTGTTGTTGGAATCCCTAGAGAGAAGGTACTATCTGGAGTGAAGCCAGATGGCAAAAAGAAGTTTATAAGTGAACTCCAGGAAGATCAGAAAGTTATTGCTATGGTTGGTGATGGAATCAATGATGCAGCTGCCTTGGCTTCATCACATATTGGTATTGCATTAGGCGGGGGTGTTGGAGCTGCTAGTGAAGTGTCTTCCATTGTACTGATGGGCAACAGGCTCTCGCAGCTTCTTGATGCATTGGATCTTAGCAGGCTTACCATGAAGACTGTGAAACAAAATCTTGGGTGGGCTTTCCTATACAACATTGTTGGAATCCCAATTGCAGCTGGATTGTTACTTCCAGTAAGTGGGACCATGTTAACTCCATCAATTGCCGGGGCTCTCATGGGCTTGAGTTCCATTGGGGTAATGACAAACTCATTGCTTCTAAGATACAGATTTTCCACAAAGCAAAAACAAATCCAGAAAGCATCCCCAATGGTCGAAACCCATGCAGATAGTGATCTTGCCCAAAAAGAGAAATTGAAATATGGACATTGA 2247 0.4357 MQLFRHFSAKEGLSGVNDSGRDSFLQVFERKMEEKHRQLKESGRELAVSWALCAVCLVGHLSHFLGAKAPWIHVFHSTGFHLSLSLFTLVGPGRQLILDGIRSLLKNAPNMNTLVGLGALSSFSVSLFAALLPNLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDTKEFDSSVEVPSDSLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGNQVAAGSINLNGTLTIEVQRPGNETAMGDIIRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLFGTRILPAALYQGTAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATKGLLLRGGNILEKFSMVDAIVFDKTGTLTIGRPVVTRIVNTSGQNKNLRYTADNDWSDIEVLRLAAGVESNTVHPVGKAIVEAAQAVNCHNAKVADGTFLEEPGSGAVAIINNNKVSVGTLEWLTRQGVNKNIHQEVEDYRNQSVVYVGVNDTVAGLVYFEDQIREDARHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGIPREKVLSGVKPDGKKKFISELQEDQKVIAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMGNRLSQLLDALDLSRLTMKTVKQNLGWAFLYNIVGIPIAAGLLLPVSGTMLTPSIAGALMGLSSIGVMTNSLLLRYRFSTKQKQIQKASPMVETHADSDLAQKEKLKYGH 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00678 748 NCBIfam HAD-IC family P-type ATPase 193 411 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g00678 748 NCBIfam HAD-IC family P-type ATPase 439 682 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g00678 748 Gene3D - 402 534 IPR023299 GO:0000166
Accr5g00678 748 SUPERFAMILY Calcium ATPase, transmembrane domain M 143 672 IPR023298 -
Accr5g00678 748 Coils Coil 25 45 - -
Accr5g00678 748 Gene3D - 161 284 - -
Accr5g00678 748 Pfam haloacid dehalogenase-like hydrolase 387 615 - -
Accr5g00678 748 PANTHER ATP7, ISOFORM B 31 714 - -
Accr5g00678 748 Pfam E1-E2 ATPase 176 370 - -
Accr5g00678 748 SFLD p-type atpase 374 653 IPR044492 -
Accr5g00678 748 SUPERFAMILY Calcium ATPase, transduction domain A 193 280 IPR008250 -
Accr5g00678 748 FunFam Copper-transporting ATPase 1, putative 162 284 - -
Accr5g00678 748 SUPERFAMILY HAD-like 390 709 IPR036412 -
Accr5g00678 748 FunFam Copper-transporting ATPase PAA1 chloroplastic 402 534 - -
Accr5g00678 748 NCBIfam heavy metal translocating P-type ATPase 111 712 IPR027256 GO:0006812|GO:0016020|GO:0019829
Accr5g00678 748 PRINTS P-type cation-transporting ATPase superfamily signature 548 558 - -
Accr5g00678 748 PRINTS P-type cation-transporting ATPase superfamily signature 391 405 - -
Accr5g00678 748 PRINTS P-type cation-transporting ATPase superfamily signature 626 638 - -
Accr5g00678 748 PRINTS P-type cation-transporting ATPase superfamily signature 603 622 - -
Accr5g00678 748 PRINTS P-type cation-transporting ATPase superfamily signature 526 537 - -
Accr5g00678 748 PRINTS P-type cation-transporting ATPase superfamily signature 230 244 - -
Accr5g00678 748 CDD P-type_ATPase_HM 46 711 - -
Accr5g00678 748 ProSitePatterns E1-E2 ATPases phosphorylation site. 393 399 IPR018303 -
Accr5g00678 748 FunFam Copper-transporting ATPase PAA1 chloroplastic 519 670 - -
Accr5g00678 748 SFLD C1.7: P-type atpase like 374 653 - -
Accr5g00678 748 Gene3D - 382 653 IPR023214 -
Accr5g00678 748 NCBIfam copper-translocating P-type ATPase 93 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00678 Accr-Chr5 30127167 30137276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00678 102 731 Primary Pumps ATPases AT1G63440 37.134 1.31e-119 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00678 K17686 - gmx:100796210 1131.7