Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00677 ATGGATTCCACGCATATGGCGCTCTTCAGAGCTTTGAATCGCCATATCTGCAGAGCTCCTTCGAGTCAATGCATTCCCACGGTTCTTCTCCGTCACAGGCTTAAATTCCTTTCTCATAACAATGCTATGCGCAACTCCAGCTCTTTTGCTTCTTCTTCCCTCTCGCTCAGAAGCTTGTGTGCGGTGGTCACTCGACTGCCCTGGCCTTTCCGGTGTGTTTCAAGCTCCGCTGCTCCGTTTGATTCTTCTGGCGTTGGAAATGGCGGGCTTGGAGGGGTGATTGGTGGTGGTGGTGGCGGAGGAGGAGGAGGAGGAGATGGCTCCGGTGGTGATTCCGGTGATGTCAATCTCAAATTGGTCGGTGATGGTGGTAAAGAACTTTCGGCACTTTCGCCTGATGTTATTATTCTCGATGTTGCGGGAATGGTGTGTGGTGGCTGTGCTGCTAATGTGAAAAGAATTCTAGAAAGTCGACCTCAAGTGTCATATGCTACTGTAAATCTAACAACTGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAACTGTACCAAATTGGCAAAAGCAATTAGGAGAAGCACTTGCAGAACATTTGAGTAGCTGTGGTTTCAAGTCTAGCCTTCGGGATTCAGGAAGAGACAGTTTCCTCCAAGTGTTTGAAAGGAAGATGGAGGAAAAGCACAGACAGTTGAAAGAAAGCGGGCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCCTTGTTGGCCATCTTTCTCATTTCCTTGGAGCGAAGGCACCTTGGATCCATGTATTTCATTCCACTGGGTTTCACCTGTCCCTGTCTTTGTTTACACTGGTTGGTCCAGGGCGTCAACTTATTCTTGATGGCATAAGAAGCCTTCTTAAAAATGCACCAAACATGAACACATTAGTTGGTCTTGGAGCTTTGTCATCATTTTCCGTCAGCCTATTTGCTGCCTTGCTGCCCAACTTGGGCTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTAGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTCTTAGTATATTGCCATCAAAAGCTCGCCTTCTGGTTAGCAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCGAATCCTTGTGCTTCCTGGAGATCGTATTCCCGCAGATGGAATTGTCAGAACTGGTAGAAGCACTGTAGATGAGTCAAGTTTTACTGGAGAGCCTTTGCCAGCAACAAAACTACCTGGGAATCAGGTTGCTGCTGGGAGTATAAATCTAAATGGCACTCTTACAATTGAAGTGCAGAGACCAGGCAATGAGACCGCCATGGGAGACATCATTCGCCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTAATGGCTGCTTCTGCAGCCACATTTACATTCTGGAGTCTGTTTGGCACACGCATTCTACCTGCTGCTCTTTATCAAGGAACTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCCACACCTACAGCTGTGCTGGTTGGAACTTCTTTAGGAGCTACAAAAGGATTACTTTTACGGGGTGGAAACATTCTGGAGAAGTTTTCAATGGTAGATGCTATTGTATTTGACAAAACAGGGACCTTGACGATTGGAAGACCTGTTGTGACCAGGATTGTCAATACAAGTGGACAAAACAAAAACTTAAGGTATACTGCAGACAATGATTGGTCAGACATTGAAGTTCTGAGATTGGCTGCTGGAGTAGAATCAAATACAGTACATCCAGTCGGTAAAGCAATTGTAGAAGCTGCTCAGGCAGTTAATTGTCACAATGCAAAGGTAGCAGATGGAACATTTTTGGAAGAACCTGGATCTGGTGCAGTAGCAATTATCAATAACAATAAGGTTTCAGTTGGGACTTTGGAATGGCTCACCAGGCAGGGAGTTAACAAAAATATTCATCAAGAAGTTGAGGACTATAGAAATCAGTCTGTTGTTTACGTGGGAGTAAATGATACTGTAGCTGGCCTTGTATATTTTGAAGACCAGATAAGGGAAGATGCAAGACATGTTGTTGAAGCTTTGTCTAAACAAGGAATTGGTGTTTATATGCTCTCAGGAGACAAAAGGAGTACGGCTGAGTATGTTGCATCTGTTGTTGGAATCCCTAGAGAGAAGGTACTATCTGGAGTGAAGCCAGATGGCAAAAAGAAGTTTATAAGTGAACTCCAGGAAGATCAGAAAGTTATTGCTATGGTTGGTGATGGAATCAATGATGCAGCTGCCTTGGCTTCATCACATATTGGTATTGCATTAGGCGGGGGTGTTGGAGCTGCTAGTGAAGTGTCTTCCATTGTACTGATGGGCAACAGGCTCTCGCAGCTTCTTGATGCATTGGATCTTAGCAGGCTTACCATGAAGACTGTGAAACAAAATCTTGGGTGGGCTTTCCTATACAACATTGTTGGAATCCCAATTGCAGCTGGATTGTTACTTCCAGTAAGTGGGACCATGTTAACTCCATCAATTGCCGGGGCTCTCATGGGCTTGAGTTCCATTGGGGTAATGACAAACTCATTGCTTCTAAGATACAGATTTTCCACAAAGCAAAAACAAATCCAGAAAGCATCCCCAATGGTCGAAACCCATGCAGATAGTGATCTTGCCCAAAAAGAGAAATTGAAATATGGACATTGA 2823 0.4478 MDSTHMALFRALNRHICRAPSSQCIPTVLLRHRLKFLSHNNAMRNSSSFASSSLSLRSLCAVVTRLPWPFRCVSSSAAPFDSSGVGNGGLGGVIGGGGGGGGGGGDGSGGDSGDVNLKLVGDGGKELSALSPDVIILDVAGMVCGGCAANVKRILESRPQVSYATVNLTTETAIVWPVSEAKTVPNWQKQLGEALAEHLSSCGFKSSLRDSGRDSFLQVFERKMEEKHRQLKESGRELAVSWALCAVCLVGHLSHFLGAKAPWIHVFHSTGFHLSLSLFTLVGPGRQLILDGIRSLLKNAPNMNTLVGLGALSSFSVSLFAALLPNLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDTKEFDSSVEVPSDSLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGNQVAAGSINLNGTLTIEVQRPGNETAMGDIIRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLFGTRILPAALYQGTAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATKGLLLRGGNILEKFSMVDAIVFDKTGTLTIGRPVVTRIVNTSGQNKNLRYTADNDWSDIEVLRLAAGVESNTVHPVGKAIVEAAQAVNCHNAKVADGTFLEEPGSGAVAIINNNKVSVGTLEWLTRQGVNKNIHQEVEDYRNQSVVYVGVNDTVAGLVYFEDQIREDARHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGIPREKVLSGVKPDGKKKFISELQEDQKVIAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMGNRLSQLLDALDLSRLTMKTVKQNLGWAFLYNIVGIPIAAGLLLPVSGTMLTPSIAGALMGLSSIGVMTNSLLLRYRFSTKQKQIQKASPMVETHADSDLAQKEKLKYGH 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00677 940 CDD P-type_ATPase_HM 238 903 - -
Accr5g00677 940 ProSiteProfiles Heavy-metal-associated domain profile. 133 207 IPR006121 GO:0046872
Accr5g00677 940 PANTHER ATP7, ISOFORM B 131 906 - -
Accr5g00677 940 ProSitePatterns E1-E2 ATPases phosphorylation site. 585 591 IPR018303 -
Accr5g00677 940 Gene3D - 574 845 IPR023214 -
Accr5g00677 940 FunFam Copper-transporting ATPase PAA1 chloroplastic 594 726 - -
Accr5g00677 940 CDD HMA 137 207 IPR006121 GO:0046872
Accr5g00677 940 SUPERFAMILY Calcium ATPase, transduction domain A 385 472 IPR008250 -
Accr5g00677 940 Gene3D - 353 476 - -
Accr5g00677 940 NCBIfam heavy metal translocating P-type ATPase 303 904 IPR027256 GO:0006812|GO:0016020|GO:0019829
Accr5g00677 940 Gene3D - 594 726 IPR023299 GO:0000166
Accr5g00677 940 NCBIfam copper-translocating P-type ATPase 285 905 - -
Accr5g00677 940 FunFam Copper-transporting ATPase 1, putative 354 476 - -
Accr5g00677 940 Pfam Heavy-metal-associated domain 137 205 IPR006121 GO:0046872
Accr5g00677 940 FunFam Copper-transporting ATPase PAA1 chloroplastic 711 862 - -
Accr5g00677 940 SFLD Haloacid Dehalogenase 566 845 - -
Accr5g00677 940 Gene3D - 134 211 - -
Accr5g00677 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 335 864 IPR023298 -
Accr5g00677 940 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Accr5g00677 940 PRINTS P-type cation-transporting ATPase superfamily signature 718 729 - -
Accr5g00677 940 PRINTS P-type cation-transporting ATPase superfamily signature 818 830 - -
Accr5g00677 940 PRINTS P-type cation-transporting ATPase superfamily signature 740 750 - -
Accr5g00677 940 PRINTS P-type cation-transporting ATPase superfamily signature 583 597 - -
Accr5g00677 940 PRINTS P-type cation-transporting ATPase superfamily signature 795 814 - -
Accr5g00677 940 SUPERFAMILY HMA, heavy metal-associated domain 135 184 IPR036163 GO:0046872
Accr5g00677 940 SUPERFAMILY HAD-like 582 901 IPR036412 -
Accr5g00677 940 Pfam haloacid dehalogenase-like hydrolase 579 807 - -
Accr5g00677 940 SFLD p-type atpase 566 845 IPR044492 -
Accr5g00677 940 ProSitePatterns Heavy-metal-associated domain. 139 168 IPR017969 GO:0046872
Accr5g00677 940 Pfam E1-E2 ATPase 368 562 - -
Accr5g00677 940 Coils Coil 217 237 - -
Accr5g00677 940 NCBIfam HAD-IC family P-type ATPase 385 603 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g00677 940 NCBIfam HAD-IC family P-type ATPase 631 874 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g00677 940 FunFam Copper-transporting ATPase PAA1, chloroplastic 133 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00677 Accr-Chr5 30127167 30140887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00677 294 923 Primary Pumps ATPases AT1G63440 37.134 5.61e-117 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00677 K17686 - gmx:100796210 1315.06