Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00662 ATGATTGTAGAGGTAAATCCTGTAGGTACAGAACTGGCAATGAATAATGTTGGTGGAGAGCAGGAAAGACTACTTGCCCATGAACCATACATCGGGTTAGAGCTTGAATCAGCAGATGATGCACTTAAGTTTTACACTTTATATGCTAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATGGATCAGTTTCTTCCCGAAGATTTGTGTGCTCAAAGGAGGGATATCAGCTCAGTTCAAGAACGGGTTGTCCAGCATTTATAAGAGTACAAAGGCGTGATTCAGGGAAGTGGGTTGTTGATCATTGCATTAAGGGCCACAATCATGAACTTGAACCTGAAAGTGAGGGTGAAAGTTGCCTTCCTAATATGCAGCAGAAAGATGCTACAGGTATAAAATCTGTTACTGAGTTGTCTCACAGACCAAGAAAAAAAATGCTTCAAGTCAAGGATGAGTTGGGCATAATTAATTTTAAGCGGATGAGGAAAGCAGATGAAGGGCCATCCAGAGCTGGGCCATATGTTGGTCAAGAATTCAGTTCATCTAATGAAGCTTACCAATCTTATCAGGCATATGCTGCATCTGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGGTCTAAAAATGATGGATTAATTACATCACGACGGTTTGTGTGCTCAAAAGAGGGGTTCCAGCACCCTTCAAGAGTTGGCTGTGGGGCTTATTTGAGAGTTAAGAGACAGCCATCGGGAAAGTGGGTTGTGGATCGTCTTCATAAGGAGCATAATCATAATCTTGATCCTGAACAAGAGGGTAAGCCTAAAAGTCTTCCTGCTTTAAATATTTTAACAGATGAGGTTGATGCAGGATTGGTAAATGGTGACTTATTTAAAATAGATAACTACCCTGTTACTAGAGGAGCTAGACAAAATCATATTAAAAGTGATTGGTACAGTATGCTTTTTGAGTATTTTCAATCAAGACAAGCAGAAGATACAGGATTTTTTCACGCTGTGGAAATTGATAATGGCAATTGTATGAGCATATTTTGGGCTGATGGCAGATCAAGGTATTCATGCAGTCAGTTTGGTGATGTCCTTGTTTTGGATACATCATATCGGAAGAGTGTTTATTTGGTTCCATTTGCTACTTTTATTGGCATTAACCATCACAAGCAACCTGTGCTTCTTGGATGCGCTCTAATTGCTGATGAATCTGAAGATTCTTTCACTTGGTTGTTTCAAACATGGATCAGGGCAATGTCTGGTCGGCAGCCACTGTCAGTGATAGCTGATCAAGACATTACAATCCAGAAGGCATTAGCTAAAGTTTTTCCAGGAACTCATCATCGTTTTTCATTGTGGCAAATTAAGGCAAAAGAACAAGAGAATGTGGGTTTATTGGGTAATAAATTTACATATGATTATGAGAGGTGCATTTACCAAAGTCAGACAGTTGAGGAATTTGACACCACATGGAATGCCCTAATCAACAAATATGGGTTGGAGAGCAATGCTTGGCTGAAGGAAATGTATGAGAAGCGTGCATCTTGGGTTCCATTATATTTGAAGGGGACCTTTTTTGCAGGCATCCATATGAATGAAAGTGTCGATCCATTCTTTGGTACACTTTTGAATGGCCAAACACCTCTGGTGGAGTTCATTTCACGGTACGAAAGAGGTCTTGAGCGACGCCGTGAGGAAGAAAGGAAAGAGGATTTTAATACCTCCAATTTCCAACCATTCTTGCAAACCAAAGAAGCAGCAGAAGATCAATGTAGAAGGGTTTATACACTTGCCGTTTTCAAAATATTTCAAAAAGAGCTCCTGCAATCCTACAGCTATCTAGGATTTAAAATTTATGAAGAAGGGGTCCTCAGCAGATATTTGGTGCGCAAGTGTGGGAATGATCCTGAGAAGCATGTAGTTACCTTTAGTGCATCCTGTATCAGTGTAAGCTGTAGCTGTCAAATGTTTGAACATGAAGGCATTCTTTGCAGACATGTTCTAAGGGTTTTCCAAATTTTGGAATTACGAGAAGTTCCACCTCGTTACATACTACACCGCTGGACCAGAAACGCCGAGAATGGCGTTTTTCCTGATGCAGAATCATGGAGCAGTCCTCAGGAGCTAAGGAATTTGATGCTATGGAGTCTAAGAGAAACTGCATGTAAATATATAGATGCTGGGGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAAGAGGGGGGCAGGAAGCTGTGTTGGCATCGTTGA 2271 0.4082 MIVEVNPVGTELAMNNVGGEQERLLAHEPYIGLELESADDALKFYTLYAKQAGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQRRDSGKWVVDHCIKGHNHELEPESEGESCLPNMQQKDATGIKSVTELSHRPRKKMLQVKDELGIINFKRMRKADEGPSRAGPYVGQEFSSSNEAYQSYQAYAASVGFRVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGKWVVDRLHKEHNHNLDPEQEGKPKSLPALNILTDEVDAGLVNGDLFKIDNYPVTRGARQNHIKSDWYSMLFEYFQSRQAEDTGFFHAVEIDNGNCMSIFWADGRSRYSCSQFGDVLVLDTSYRKSVYLVPFATFIGINHHKQPVLLGCALIADESEDSFTWLFQTWIRAMSGRQPLSVIADQDITIQKALAKVFPGTHHRFSLWQIKAKEQENVGLLGNKFTYDYERCIYQSQTVEEFDTTWNALINKYGLESNAWLKEMYEKRASWVPLYLKGTFFAGIHMNESVDPFFGTLLNGQTPLVEFISRYERGLERRREEERKEDFNTSNFQPFLQTKEAAEDQCRRVYTLAVFKIFQKELLQSYSYLGFKIYEEGVLSRYLVRKCGNDPEKHVVTFSASCISVSCSCQMFEHEGILCRHVLRVFQILELREVPPRYILHRWTRNAENGVFPDAESWSSPQELRNLMLWSLRETACKYIDAGATSLDKYKLAYEILQEGGRKLCWHR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00662 756 SMART 26again6 653 680 IPR006564 GO:0008270
Accr5g00662 756 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Accr5g00662 756 Pfam FAR1 DNA-binding domain 195 268 IPR004330 -
Accr5g00662 756 ProSiteProfiles Zinc finger SWIM-type profile. 630 678 IPR007527 GO:0008270
Accr5g00662 756 Pfam MULE transposase domain 367 460 IPR018289 -
Accr5g00662 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 134 IPR031052 GO:0006355
Accr5g00662 756 Pfam SWIM zinc finger 654 675 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00662 Accr-Chr5 29914176 29916446 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr5g00662 MULE 5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00662 - - gmx:100780519 1197.19