Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00661 ATGGGGTTTCCTCCTTTTGTACTTAAACACATTCCTTTTGTACTTCTTGCTGCAATGAGCATAATTGCCTTAGCTCAGGAAGGTCTGATTGGTGAGATAGATGAGATAGGTGAGATAGGTGGTCTTCAGGCTCTCTTGAGAATTTTCAAAGATCCTACTCTAGCTAGTAACTGGACTGGTGAGCCCTGTGATAATGGTGATCAATCAAAATGGACAGGGATTCAGTGCTCAAACGGTCATGTCAGTGGTATAGAGTTGGAAGGAAGGGGTTTGGTGGGAGAACTCATATTTGGTGATCCTGCATTTGCGTTGCTTCCAAACTTGTCGTTCATAAGCTTCAAGAACAATGCTCTAAGTGGAAATATGATGGACTTGACCCACAATCCCCAAATGCATCACATTGATCTGTCTGGCAACGAACTTAATGCGTCTATTTCCTCGTTCTTTTTGGGTCTCAACCTCTTGGACACGTTGTTGCTGCAGGACAATAGGCTCACAGGTCACATCCCCGCGTTTCAACAGCAAAGTTTGAAGACATTCAACGTATCGAACAACGATCTCGAAGGCAGAATCCCTGAAACTCCAACTCTTCAATCATTTGGCCCTGATTCGTACTCTGGAAATCCGAGATTATGTGGTCCACCTTCTCACAATCCCTGCCCTGATTCATCTCCAGCACCTGAAAATGATCGAAGTCACAATCACTCTCTTTTATTAATTATCGTCGTAGTTATTTTCCTTGCTGTAGGATTGTTACTGATGATTTACCATAAAAAAGCAACAAAGCTTATTAAAATAGCAAAGGGGAAAATTTCCACAGTTAGAGATGAAGAGATTGTTCATGACAATGTGCAAACAGAAGGAGAGAGAAACATGGGAGTTGAAATTCGAAGCGAACTCATATTCTTCAAGGACAGACCTAAGTTTCAAATGGTTGAACTTCTTAGAGCTACTGCTGAGGGACTTGGTAATCAGGGAATCATGGGAAATAGTTATAAGGCTATGCTACATGGTGGAGCTACAGTTGTTGTAAAGAAGCTGAGGGACTTGAAACCATTAAGTGAAGAGGAATTTGCAAAGCTATTGCATAAGATTTATGACATGGAGCACCCAAATTTGTTGCCCTTGCTTGCTTATTATTATTCCCAAGATGGGAAGATGCTGCTCTATCAATATGCACAGAACGGAGATCTTTTCTCCCGGCTTCATGGTACTAGAGATAGAAACCGGATACCATTCAAATGGCGCTCAAGATTATCAGTTGCAAGAGGGGTAGCTCAAGCATTGGATTACCTGCACCAGAACACCAACACCAACATCGTCCCTCATGGAAACTTGAAGTCCTCAAACGTCCTCTTAGACAAAGACGACGAACCCCTTGTCTCCGACTACGGTCTCACCTCCCTCATAACCCCGCCCATAGCAACTCAACGCTTGGTCGTATTCAAATCACCAGAATACGAACACGCTAAAACAGTCACGAAGCAATCTGACGTGTGGAGCTACGGCTTGCTTCTCATAGAACTTTTAACAAACAGAGTATCTGCGTGCTCGGCGCCTCCAGGGTTTCAAGGACTGGATCTCAGTAAATGGGTTCGCAGAGCAGTGAGAGAAGAATCGGCGGCTCAGATTTTCGATGCTGAGATCGCTGTAGAAAGAAAAGATCTTCCTGGGATTCTAAAAGTGCTCGAGATAGCAATACGATGCATTGATAGGTTGCCTGAGAATCGGCCGGAGATGAGGGAGGTGTTGAGAGAATTGGAGAAGGTAGAGGCTACATTGCCGGCGAAAGATGAAGAGAACGAGGAATCTAGAGATAGGTATTCCACTTCCTATGGATCTTTTTCAACCAGTTCTTCAGGGATAATCCGAGACGACAAGTGGAGCAAGTAG 1893 0.439 MGFPPFVLKHIPFVLLAAMSIIALAQEGLIGEIDEIGEIGGLQALLRIFKDPTLASNWTGEPCDNGDQSKWTGIQCSNGHVSGIELEGRGLVGELIFGDPAFALLPNLSFISFKNNALSGNMMDLTHNPQMHHIDLSGNELNASISSFFLGLNLLDTLLLQDNRLTGHIPAFQQQSLKTFNVSNNDLEGRIPETPTLQSFGPDSYSGNPRLCGPPSHNPCPDSSPAPENDRSHNHSLLLIIVVVIFLAVGLLLMIYHKKATKLIKIAKGKISTVRDEEIVHDNVQTEGERNMGVEIRSELIFFKDRPKFQMVELLRATAEGLGNQGIMGNSYKAMLHGGATVVVKKLRDLKPLSEEEFAKLLHKIYDMEHPNLLPLLAYYYSQDGKMLLYQYAQNGDLFSRLHGTRDRNRIPFKWRSRLSVARGVAQALDYLHQNTNTNIVPHGNLKSSNVLLDKDDEPLVSDYGLTSLITPPIATQRLVVFKSPEYEHAKTVTKQSDVWSYGLLLIELLTNRVSACSAPPGFQGLDLSKWVRRAVREESAAQIFDAEIAVERKDLPGILKVLEIAIRCIDRLPENRPEMREVLRELEKVEATLPAKDEENEESRDRYSTSYGSFSTSSSGIIRDDKWSK 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00661 630 Gene3D Ribonuclease Inhibitor 42 222 IPR032675 -
Accr5g00661 630 Gene3D Phosphorylase Kinase; domain 1 283 392 - -
Accr5g00661 630 MobiDBLite consensus disorder prediction 592 607 - -
Accr5g00661 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 593 IPR046959 -
Accr5g00661 630 Gene3D Transferase(Phosphotransferase) domain 1 393 615 - -
Accr5g00661 630 SUPERFAMILY Protein kinase-like (PK-like) 325 593 IPR011009 -
Accr5g00661 630 Coils Coil 580 607 - -
Accr5g00661 630 MobiDBLite consensus disorder prediction 608 630 - -
Accr5g00661 630 Pfam Protein tyrosine and serine/threonine kinase 325 587 IPR001245 GO:0004672|GO:0006468
Accr5g00661 630 MobiDBLite consensus disorder prediction 191 229 - -
Accr5g00661 630 MobiDBLite consensus disorder prediction 191 205 - -
Accr5g00661 630 SUPERFAMILY L domain-like 97 216 - -
Accr5g00661 630 ProSiteProfiles Protein kinase domain profile. 314 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00661 630 MobiDBLite consensus disorder prediction 592 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00661 Accr-Chr5 29910043 29912411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00661 40 591 Receptor kinase-like Gene Family AT4G31250 33.655 5.37e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr5g00661 PK_Tyr_Ser-Thr 6.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00661 - - pcin:129284917 629.017