Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00652 ATGTACTTGTCTCACAACAATCTTATTGGTACCATTCCAACTGAATTTGGAACTCTTCATAATCTAATGTATCTAGACTTGTCTTGTAACAATCTCATTGGTGATATCCCATCTTCGATTTTCAATTTGAAAAATTTACAAGACTTTGATGTTTCTCAAAATCAACTAAGTGGTAGCATGCCACGACGGTTTGGAAATTTCTCAAGTAGTTTTCATCTAAATATCTCTGAAAATAATCTGTGTGGAAGCGTGCCCTACATTTTGAACGATTATTTTCATGTTGATGCTGACTTTAGTCACAACAAATTCAACGGAACGTTACCATCTATTATATGCAGCGTTCCACCATTGTGTAGCATTAACTTGAGCTACAATAAAATCTCAGGTAGTATACCTGGAGATCTTTTTAGGATGCAGTACATCAACTTATCATACAATCTTCTCAGTGACAACGAATTACTTGGTCTAGAGAAGAAACAAGGTTTTTCTAAAGGGTTACAGTCTTTGTTGAAAATCATTATTCCTTTTGCAATTTTTCTTGTCATTATATTTGTTGTGGGTTTCATCTTATTTGAATCTTTCAAAAAGAACAAGAAATCTATAATTCAGACAAGAGAATCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGAAAAATTGCATATGAAGACATCATTGAAGCAACAGAGGGCTTTGACATCAAATACTGTATTGGAACTGGTGCCTATGGAAGCGTTTATAGAGCACAACTTCCTAGTGGCAAAATTGTAGCATTGAAAAAACTTCATAGAAGAGAATATGGAAACACATCTTTTGCTAAGAGTTTTCACAATGAAGTGAAGATGTTAAGTGAAATTCGACATCGCAGTATTATAAAGCTCCATGGTTTTTGTTTGCATAATCAATCCATGTTTCTCATATATGAATACATGGAAAGAGGAAGCCTTTTTTATGTCTTGAACAATGATTATGAGGCTAAAGAGTTTGATTGGAGTATGAGGGTGAATACCATCAAAGGAATAGCAAATGCTTTGTTCTACATGCATCATGATTGTGCTCCTCCAATTATCCATCGAGACGTAACAAGTAATAATGTATTGTTGAACTCAAAGATGAAGGCTTTTCTATCTGACTTTGGCACAGCTAGAATTCTTGATCCAGATTCATCTAATCAAACTCTCTTAGTTGGTACTTATGGTTATGTTGCTCCAGAACTTGCATACACCTTAGTTGTGACTGCAAAATGTGATGTTTATAGTTTTGGAGTGTTGATATTCGAAACATTCATGGGAAGACATCCTGGAGAGTTGATATTGTCATTTTCAAATACCTGTTTTGAAAGCATTTTACTAATAGATGTCTTAGATCCACGCCTCCCACTTCCATCACCAAAAGATGCACAAGATGTGACTTTTTTGGTTACGATAGCATTAGCATGCTTGAATTCATCTCCCAAATCTCGACCATCAATGCACCAAGTGTCTCAAAGGCTTTTATCCTCAGATCAGTCATTAGTCATTCCTTTCAATAACATCTCACTACAACATTTACTGAATCAAGATATGCAAATAATATAG 1584 0.3466 MYLSHNNLIGTIPTEFGTLHNLMYLDLSCNNLIGDIPSSIFNLKNLQDFDVSQNQLSGSMPRRFGNFSSSFHLNISENNLCGSVPYILNDYFHVDADFSHNKFNGTLPSIICSVPPLCSINLSYNKISGSIPGDLFRMQYINLSYNLLSDNELLGLEKKQGFSKGLQSLLKIIIPFAIFLVIIFVVGFILFESFKKNKKSIIQTRESKNGDLFSIWNYDGKIAYEDIIEATEGFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYGNTSFAKSFHNEVKMLSEIRHRSIIKLHGFCLHNQSMFLIYEYMERGSLFYVLNNDYEAKEFDWSMRVNTIKGIANALFYMHHDCAPPIIHRDVTSNNVLLNSKMKAFLSDFGTARILDPDSSNQTLLVGTYGYVAPELAYTLVVTAKCDVYSFGVLIFETFMGRHPGELILSFSNTCFESILLIDVLDPRLPLPSPKDAQDVTFLVTIALACLNSSPKSRPSMHQVSQRLLSSDQSLVIPFNNISLQHLLNQDMQII 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00652 527 ProSitePatterns Tyrosine protein kinases specific active-site signature. 358 370 IPR008266 GO:0004672|GO:0006468
Accr5g00652 527 SUPERFAMILY Protein kinase-like (PK-like) 216 500 IPR011009 -
Accr5g00652 527 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524
Accr5g00652 527 Pfam Protein kinase domain 238 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00652 527 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 87 - -
Accr5g00652 527 PANTHER LEUCINE RICH REPEAT KINASE 2 3 505 - -
Accr5g00652 527 ProSiteProfiles Leucine-rich repeat profile. 21 43 IPR001611 GO:0005515
Accr5g00652 527 Gene3D Ribonuclease Inhibitor 1 158 IPR032675 -
Accr5g00652 527 FunFam Leucine-rich repeat receptor protein kinase MSP1 196 312 - -
Accr5g00652 527 Gene3D Transferase(Phosphotransferase) domain 1 313 511 - -
Accr5g00652 527 FunFam MDIS1-interacting receptor like kinase 2 313 506 - -
Accr5g00652 527 Pfam Leucine rich repeat 21 80 IPR001611 GO:0005515
Accr5g00652 527 Gene3D Phosphorylase Kinase; domain 1 194 312 - -
Accr5g00652 527 SUPERFAMILY L domain-like 2 151 - -
Accr5g00652 527 ProSiteProfiles Protein kinase domain profile. 234 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00652 Accr-Chr5 29604981 29607191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00652 3 406 Receptor kinase-like Gene Family AT4G08850 39.052 6.42e-93 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00652 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00652 - - pcin:129305349 677.552