Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr5g00650 | ATGAGACATATGGACAGAGTGATTTCGTCTTTCATGGCTGCTTTACTTCTTTGCGCAATCTTAGTGTTTAATTTGGTGCTGAATATTTCTGGTAACGCCGAAGGTGATGCCCTGAATGCATTTAAGACCAGCGTAGCTGATCCAAACAATGTTCTTCAAAGCTGGGATGCTACCCTTGTCAATCCTTGCACATGGTTTCATGTCACATGCAATAGTGATAATAGCGTGACCCGTGTTGATCTTGGAAATGCCAACCTTTCGGGTCAACTAGTTGCACAGCTTGGTCAACTCCCAAATTTGCAGTACTTGGAACTTTATAGCAATAAGATAACTGGAAAAATACCAGATGAATTTGGAAATTTGACAAATTTGGTGAGCTTGGATCTGTACACCAATCGCATATCTGGTAGCATACCCAAAACATTTGGCAATCTTCAAAAACTACGTTTCCTGCGTCTCAACAATAATACCTTGAGTGGAGCCATTCCCATAACCTTGACTACTGTTAATTCACTGCAAGTCCTTGATCTTTCAGCAAACAAGCTACAAGGAGAAATCCCAATTAATGGTTCATTTCAATCATTTACTCTACTCAGTTTTCTGAATAATCCTGAATTGAAAGCACTAAACATTACACCTCGACCAATTCCACCAACGCCGCCGCCATCTCATTCAGGCAGTAGTACTACTGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCGGCCCCTGCAATTGCACTTGCGTATTGCCGGAAGAGGAAACCCCAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCTCTGCGTGAGCTGCAAGTTGCAACGGATGGCTTTAGTAACAAACACATTCTGGGCAGAGGTGGATTTGGTAAAGTTTACAAGGGACGGTTAGCTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAAGGTGGGGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCCGTCCACCGTAATTTGCTGCGGCTTCGTGGTTTTTGCATGACACCGACTGAACGGTTGCTTGTGTATCCTTACATGGCTAACGGTAGTGTGGCATCTTGTTTACGAGACCGCCCGGAGTCAAACCCCCCGCTTGAATGGCCTAAACGGAAGCGAATCGCGCTGGGAGCTGCAAAGGGGCTTGCTTATTTGCATGATCATTGTGATCCGAAGATCATTCACCGTGATGTTAAAGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTTGGGTTGGCAAAACTCATGAATTACAAAGATACTCATGTTACCACAGCTGTGCGCGGTACAATTGGGCACATTGCGCCAGAATACCTATCCACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTGAACTGATAACTGGACAGAGGGCTTTCGATCTTGCACGACTTGCCAACGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAAATTGGAAACACTGGTGGATGCTGATTTGGTGGGTGATTATGATGAAGAGGAGGTAGAGCAACTAATCCAAGTGGCCTTGCTTTGCACACAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGATCAATGGCAGAAAGACGAGATGCATCGGCGAGATAATCAAACCCTTCTCCCTAGTCATAGTTGGCCGATTGCGGATTCAGCTTCACATATCCCCCCAGATGAACTGTCGGGTCCCAGATGA | 1857 | 0.4475 | MRHMDRVISSFMAALLLCAILVFNLVLNISGNAEGDALNAFKTSVADPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNKITGKIPDEFGNLTNLVSLDLYTNRISGSIPKTFGNLQKLRFLRLNNNTLSGAIPITLTTVNSLQVLDLSANKLQGEIPINGSFQSFTLLSFLNNPELKALNITPRPIPPTPPPSHSGSSTTGAIAGGVAAAAALMFAAPAIALAYCRKRKPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDGFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRDRPESNPPLEWPKRKRIALGAAKGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLVGDYDEEEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQKDEMHRRDNQTLLPSHSWPIADSASHIPPDELSGPR | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr5g00650 | 618 | Gene3D | Ribonuclease Inhibitor | 31 | 213 | IPR032675 | - | |
Accr5g00650 | 618 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 418 | 430 | IPR008271 | GO:0004672|GO:0006468 | |
Accr5g00650 | 618 | SMART | LRR_typ_2 | 169 | 194 | IPR003591 | - | |
Accr5g00650 | 618 | SMART | LRR_typ_2 | 121 | 144 | IPR003591 | - | |
Accr5g00650 | 618 | SMART | LRR_typ_2 | 97 | 120 | IPR003591 | - | |
Accr5g00650 | 618 | Gene3D | Transferase(Phosphotransferase) domain 1 | 372 | 589 | - | - | |
Accr5g00650 | 618 | Gene3D | Phosphorylase Kinase; domain 1 | 264 | 371 | - | - | |
Accr5g00650 | 618 | FunFam | Somatic embryogenesis receptor kinase 1 | 30 | 221 | - | - | |
Accr5g00650 | 618 | Pfam | Protein kinase domain | 296 | 566 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr5g00650 | 618 | FunFam | Somatic embryogenesis receptor kinase 1 | 264 | 371 | - | - | |
Accr5g00650 | 618 | Pfam | Leucine rich repeat | 123 | 182 | IPR001611 | GO:0005515 | |
Accr5g00650 | 618 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 570 | IPR011009 | - | |
Accr5g00650 | 618 | ProSitePatterns | Protein kinases ATP-binding region signature. | 301 | 323 | IPR017441 | GO:0005524 | |
Accr5g00650 | 618 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - | |
Accr5g00650 | 618 | SUPERFAMILY | L domain-like | 34 | 215 | - | - | |
Accr5g00650 | 618 | Pfam | Leucine Rich Repeat | 99 | 121 | IPR001611 | GO:0005515 | |
Accr5g00650 | 618 | SMART | serkin_6 | 295 | 569 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr5g00650 | 618 | ProSiteProfiles | Protein kinase domain profile. | 295 | 574 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr5g00650 | 618 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 372 | 589 | - | - | |
Accr5g00650 | 618 | MobiDBLite | consensus disorder prediction | 587 | 618 | - | - | |
Accr5g00650 | 618 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 12 | 579 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr5g00650 | Accr-Chr5 | 29309250 | 29315688 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr5g00650 | 11 | 618 | Receptor kinase-like Gene Family | AT4G33430 | 73.485 | 0.0 | 923 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Accr5g00650 | Pkinase | 5.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr5g00650 | K13416 | - | gmx:100800522 | 965.681 |