Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00650 ATGAGACATATGGACAGAGTGATTTCGTCTTTCATGGCTGCTTTACTTCTTTGCGCAATCTTAGTGTTTAATTTGGTGCTGAATATTTCTGGTAACGCCGAAGGTGATGCCCTGAATGCATTTAAGACCAGCGTAGCTGATCCAAACAATGTTCTTCAAAGCTGGGATGCTACCCTTGTCAATCCTTGCACATGGTTTCATGTCACATGCAATAGTGATAATAGCGTGACCCGTGTTGATCTTGGAAATGCCAACCTTTCGGGTCAACTAGTTGCACAGCTTGGTCAACTCCCAAATTTGCAGTACTTGGAACTTTATAGCAATAAGATAACTGGAAAAATACCAGATGAATTTGGAAATTTGACAAATTTGGTGAGCTTGGATCTGTACACCAATCGCATATCTGGTAGCATACCCAAAACATTTGGCAATCTTCAAAAACTACGTTTCCTGCGTCTCAACAATAATACCTTGAGTGGAGCCATTCCCATAACCTTGACTACTGTTAATTCACTGCAAGTCCTTGATCTTTCAGCAAACAAGCTACAAGGAGAAATCCCAATTAATGGTTCATTTCAATCATTTACTCTACTCAGTTTTCTGAATAATCCTGAATTGAAAGCACTAAACATTACACCTCGACCAATTCCACCAACGCCGCCGCCATCTCATTCAGGCAGTAGTACTACTGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCGGCCCCTGCAATTGCACTTGCGTATTGCCGGAAGAGGAAACCCCAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCTCTGCGTGAGCTGCAAGTTGCAACGGATGGCTTTAGTAACAAACACATTCTGGGCAGAGGTGGATTTGGTAAAGTTTACAAGGGACGGTTAGCTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAAGGTGGGGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCCGTCCACCGTAATTTGCTGCGGCTTCGTGGTTTTTGCATGACACCGACTGAACGGTTGCTTGTGTATCCTTACATGGCTAACGGTAGTGTGGCATCTTGTTTACGAGACCGCCCGGAGTCAAACCCCCCGCTTGAATGGCCTAAACGGAAGCGAATCGCGCTGGGAGCTGCAAAGGGGCTTGCTTATTTGCATGATCATTGTGATCCGAAGATCATTCACCGTGATGTTAAAGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTTGGGTTGGCAAAACTCATGAATTACAAAGATACTCATGTTACCACAGCTGTGCGCGGTACAATTGGGCACATTGCGCCAGAATACCTATCCACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTGAACTGATAACTGGACAGAGGGCTTTCGATCTTGCACGACTTGCCAACGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAAATTGGAAACACTGGTGGATGCTGATTTGGTGGGTGATTATGATGAAGAGGAGGTAGAGCAACTAATCCAAGTGGCCTTGCTTTGCACACAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGATCAATGGCAGAAAGACGAGATGCATCGGCGAGATAATCAAACCCTTCTCCCTAGTCATAGTTGGCCGATTGCGGATTCAGCTTCACATATCCCCCCAGATGAACTGTCGGGTCCCAGATGA 1857 0.4475 MRHMDRVISSFMAALLLCAILVFNLVLNISGNAEGDALNAFKTSVADPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNKITGKIPDEFGNLTNLVSLDLYTNRISGSIPKTFGNLQKLRFLRLNNNTLSGAIPITLTTVNSLQVLDLSANKLQGEIPINGSFQSFTLLSFLNNPELKALNITPRPIPPTPPPSHSGSSTTGAIAGGVAAAAALMFAAPAIALAYCRKRKPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDGFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRDRPESNPPLEWPKRKRIALGAAKGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLVGDYDEEEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQKDEMHRRDNQTLLPSHSWPIADSASHIPPDELSGPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00650 618 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Accr5g00650 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Accr5g00650 618 SMART LRR_typ_2 169 194 IPR003591 -
Accr5g00650 618 SMART LRR_typ_2 121 144 IPR003591 -
Accr5g00650 618 SMART LRR_typ_2 97 120 IPR003591 -
Accr5g00650 618 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Accr5g00650 618 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Accr5g00650 618 FunFam Somatic embryogenesis receptor kinase 1 30 221 - -
Accr5g00650 618 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00650 618 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Accr5g00650 618 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Accr5g00650 618 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
Accr5g00650 618 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Accr5g00650 618 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Accr5g00650 618 SUPERFAMILY L domain-like 34 215 - -
Accr5g00650 618 Pfam Leucine Rich Repeat 99 121 IPR001611 GO:0005515
Accr5g00650 618 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00650 618 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00650 618 FunFam Somatic embryogenesis receptor-like kinase 1 372 589 - -
Accr5g00650 618 MobiDBLite consensus disorder prediction 587 618 - -
Accr5g00650 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00650 Accr-Chr5 29309250 29315688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00650 11 618 Receptor kinase-like Gene Family AT4G33430 73.485 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Accr5g00650 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00650 K13416 - gmx:100800522 965.681