Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00643 ATGGCAGATAACACGGTGAATCTTCCTCCAGGGTTCAGATTCTGCCCCACTGATGAAGAATTGATAGTCCATTTCCTTCACAGAAAAGCTTCACTCCTACCCTGTCACCCTGATGTCATCCCTGACCTGGACCTCTATCCCTACGATCCATGGGACCTCCAAGGGAAGGCTCTAGGGGAGGGAAACCAATGGTATTATTATAGCAGGAGGACTCAGAATAGGGTTACAGTGAATGGGTATTGGAAGGCAATGGGAATGGAAGAAACAGTGATTGCGGCAAACAGCAATAATAAGAGAGTTGGAATGAAGAAATATTTTGTGTTTTATGAAGGAGAATCTCCTAATTCTGGTATCAAAACCAACTGGGTAATGCAAGAGTATCGTCTTTCAGATTCTTCTTCTTCCTCTAGAAGAAGATCACAACCAAAACCAGATTACAGTAAGTGGGTGATTTGCCGAGTTTATGAGCAAGATAATGACGATGATCATAGTGGTGGAGGTGGTGATAATGGAATAGAGCTGTCTTGTTTGGATGAAGTGTTCTTGTCCATGGATGATCTTGAAGAAATAAGCTTACCAATTAGTTAG 588 0.4235 MADNTVNLPPGFRFCPTDEELIVHFLHRKASLLPCHPDVIPDLDLYPYDPWDLQGKALGEGNQWYYYSRRTQNRVTVNGYWKAMGMEETVIAANSNNKRVGMKKYFVFYEGESPNSGIKTNWVMQEYRLSDSSSSSRRRSQPKPDYSKWVICRVYEQDNDDDHSGGGGDNGIELSCLDEVFLSMDDLEEISLPIS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00643 195 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Accr5g00643 195 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Accr5g00643 195 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Accr5g00643 195 PANTHER NAC TRANSCRIPTION FACTOR 56 8 162 - -
Accr5g00643 195 FunFam NAC domain-containing protein 104 17 160 - -
Accr5g00643 195 Pfam No apical meristem (NAM) protein 9 129 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00643 Accr-Chr5 29184390 29185173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00643 7 157 NAC Transcription Factor Family AT1G69490 44.654 6.04e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr5g00643 NAM 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00643 - - gmx:100793989 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00643 5 29184390 29185173 Accr5g00643 5 29184390 29185173 CCT
Accr5g00643 5 29184390 29185173 Accr5g00643 5 29184390 29185173 ECH