Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00635 ATGGACAGAAGTGTTGGAATTGTGGCTGATGAGTCGAGCATCATGAAAGCAGTTGAACCATTGCCAGAGGATTTTGATCCTACGGCTGTGATTAAGGATCCCGTGCCACCCGTAGTTGAAAATAATGGTAGTGTTCGTGGGGTGACCAAGATGAGGGAGGATAAAAGTAAAAGAGAGATAGTTCTAGGCAGAAATGTTCATACCTCATGCTTGGAAGTCACAGAACCAGATGCTGATGATGAGATGACAGGGGACAGGGATGCTTATATGGCAAGTGTTTTGGCTAGATACAGGAAATCTCTGATGGAAAGGACAAAGCATCATTTAGGTTATCCCTATAATTTGGATTTTGACTATGGTGCCCTTGCCCAGCTGCAGCACTTTTCTATAAACAACTTAGGAGATCCATTTATTGAAAGTAACTATGGTGTCCATTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCCGATTATGGGAGATTGAGAAAAATGAGTACTGGGGCTATATAACAAACTGTGGCACAGAAGGGAATCTACATGGCATTTTGGTTGGGAGAGAGGTTTTCCCAGATGGGATTCTGTATACCTCACGGGAAACACATTATTCTATTTTCAAAGCTGCTCGTATGTACAGAATGGAATGTATGAAAGTTGACACTCACTGTACTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGATTTCTCGTAACAAAGACAAGCCGGCAATTGTAAATGTAAATATAGGCACAACAGTCAAAGGAGCTGTGGATGATCTTGATCTAGTAATAAAGACTCTTGAAGAAGCAGGATTTTCACACAACCGATTCTACATCCATTGTGATGGAGCTTTATTTGGTCTCATGATGCCTTTTGTCAAACGCGCTCCAAAAGTCTCTTTTAAGAAGCCTATAGGAAGTGTGAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCTATGCCTTGTGGTGTGCAGATAACACGATTGGAGCACGTCAATGTTCTCTCAAGGAATGTGGAGTACCTAGCTTCTAGGGATGCCACAATCATGGGCAGTCGAAATGGACATGCTCCCATCTTCCTCTGGTACACCTTAAACCGTAAGGGATACCGGGGTTTCCAGAAAGAAGTACAGAAATGCCTGAGGAATGCACATTACCTGAAAGACCGCCTCAGAGACTCTGGGATTGGTGCGATGCTTAATGAGCTTAGCAGCACGGTTGTGTTTGAGCGGCCACATGACGAGGAGTTTACTCGCAGGTGGCAACTAGCATGCCAAGGCAACATTGCTCATGTCGTGGTGATGCCAAACATTACAATTGAGAAGCTCGACAAATTTCTGGAGGAGTTAGTGGTGAAACGAGCAAAGTGGTTTGAAGATGGCAACTGCCAGCCTCGCTGCATTGCGTCTGATGTGGGTGAAAGTAGCTGCCTCTGTGCCTTGCACAAGTGA 1458 0.4458 MDRSVGIVADESSIMKAVEPLPEDFDPTAVIKDPVPPVVENNGSVRGVTKMREDKSKREIVLGRNVHTSCLEVTEPDADDEMTGDRDAYMASVLARYRKSLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYTSRETHYSIFKAARMYRMECMKVDTHCTGEIDCDDFKAKISRNKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEEAGFSHNRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHVNVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRDSGIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDKFLEELVVKRAKWFEDGNCQPRCIASDVGESSCLCALHK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00635 485 Gene3D Aspartate Aminotransferase, domain 1 368 457 IPR015422 GO:0003824
Accr5g00635 485 PANTHER - 47 485 - -
Accr5g00635 485 SUPERFAMILY PLP-dependent transferases 104 452 IPR015424 -
Accr5g00635 485 Gene3D - 124 367 IPR015421 GO:0003824
Accr5g00635 485 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 309 330 IPR021115 GO:0016831
Accr5g00635 485 Pfam Pyridoxal-dependent decarboxylase conserved domain 195 407 IPR002129 GO:0016830|GO:0019752|GO:0030170
Accr5g00635 485 FunFam Serine decarboxylase 1 124 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00635 Accr-Chr5 29074122 29083141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00635 208 475 Calmodulin-binding Proteins AT1G65960 23.208 4.51e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00635 K25193 - qsa:O6P43_012276 853.973