Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00622 ATGAATCACGCCGCGGATGCGCAGATGACTGATTTGATGACAATCACTCGCTTCGTTCTCAACGAACAGTCGAAGCACAAGCAATCGCGTGGCGATTTTACCATTCTCCTCAATCACATCGTTCTTGGCTGCAAATTTGTCTGCTCTTCTGTTACTAAGGCAGGGCTGGCAAAATTGCTCGGACTTGCAGGGGAGATCAATGTTCAAGGTGAAGATCAAAAGAAATTGGATGTTCTTTCCAATGAAGTGTTTGTCAAGGCCTTAATTAGCAGTGGACGTACTTGCATTCTTGTTTCTGAAGAGAATGAAGATCCTATATTTGTGGAGCCATCGCAACGTGGAAAATACATTGTTGTATTTGACCCTCTGGATGGATCTTCAAACATCGACTGTGGTGTTTCCATAGGAACTATCTTTGGCATTTATCTGGTGAAGGATCTGAATAATCCTACTGTGGATGATATTTTACAATCTGGTAACAACTTGTTAGCAGCTGGTTACTGCATGTATGGAAGCTCTTGTACGTTTGTGCTAAGCACAGGAAATGGAGTAAATGGCTTCACACTTGATCCTTCCCTTGGGGAATTCATTTTGACAAACCCAAATATCAAGATACCGAAGAAAGGAAAAATTTATTCCGTGAATGAGGGGAATGCTAAATATTGGGATGAACCTACTGCCAAATATGTAGAAAGCTGCAAGTATCCTCAAGATGGTTCACCACCTAAGTCTCTTAGGTACATTGGAAGTATGGTTGCTGATGTCCACCGGACATTGCTTTATGGCGGTATCTTCATGTACCCTGCTGATAAAAAAAGCTTAAGTGGAAAGCTCCGGATTCTGTATGAAGTGTTTCCCATGTCCTACTTGATGGAACAAGCAGGAGGTCAAGCTTTTACAGGAAAACAAAGGGCACTTGACTTGGTTCCAAAGAAAGTGCACGATCGGTCTCCAATATTCTTAGGCAGTTACGATGATGTTGAGCAGATTAAAGCTCTCTATGCAGCATCTGCAGCAGCAGAATCAAATGGGGATGCTTGA 1041 0.4246 MNHAADAQMTDLMTITRFVLNEQSKHKQSRGDFTILLNHIVLGCKFVCSSVTKAGLAKLLGLAGEINVQGEDQKKLDVLSNEVFVKALISSGRTCILVSEENEDPIFVEPSQRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYLVKDLNNPTVDDILQSGNNLLAAGYCMYGSSCTFVLSTGNGVNGFTLDPSLGEFILTNPNIKIPKKGKIYSVNEGNAKYWDEPTAKYVESCKYPQDGSPPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSLSGKLRILYEVFPMSYLMEQAGGQAFTGKQRALDLVPKKVHDRSPIFLGSYDDVEQIKALYAASAAAESNGDA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00622 346 Gene3D - 204 345 - -
Accr5g00622 346 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Accr5g00622 346 Gene3D - 4 203 - -
Accr5g00622 346 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Accr5g00622 346 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Accr5g00622 346 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Accr5g00622 346 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Accr5g00622 346 CDD FBPase 20 331 IPR000146 GO:0005975|GO:0016791
Accr5g00622 346 FunFam Fructose-1,6-bisphosphatase class 1 204 337 - -
Accr5g00622 346 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 200 IPR033391 -
Accr5g00622 346 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Accr5g00622 346 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Accr5g00622 346 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Accr5g00622 346 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Accr5g00622 346 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Accr5g00622 346 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Accr5g00622 346 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 4 335 IPR000146 GO:0005975|GO:0016791
Accr5g00622 346 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Accr5g00622 346 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00622 Accr-Chr5 28733354 28738492 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr5g00622 FBPase 2.2e-77 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00622 K03841 - tcc:18607389 574.318